Bromine in PDB 7kk8: Fluoride Channel Fluc-EC2 Mutant S81T with Bromide

Protein crystallography data

The structure of Fluoride Channel Fluc-EC2 Mutant S81T with Bromide, PDB code: 7kk8 was solved by B.C.Mcilwain, R.B.Stockbridge, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 28.44 / 2.70
Space group P 41
Cell size a, b, c (Å), α, β, γ (°) 87.06, 87.06, 143.15, 90, 90, 90
R / Rfree (%) 21.7 / 25.6

Other elements in 7kk8:

The structure of Fluoride Channel Fluc-EC2 Mutant S81T with Bromide also contains other interesting chemical elements:

Fluorine (F) 1 atom
Sodium (Na) 1 atom

Bromine Binding Sites:

The binding sites of Bromine atom in the Fluoride Channel Fluc-EC2 Mutant S81T with Bromide (pdb code 7kk8). This binding sites where shown within 5.0 Angstroms radius around Bromine atom.
In total 2 binding sites of Bromine where determined in the Fluoride Channel Fluc-EC2 Mutant S81T with Bromide, PDB code: 7kk8:
Jump to Bromine binding site number: 1; 2;

Bromine binding site 1 out of 2 in 7kk8

Go back to Bromine Binding Sites List in 7kk8
Bromine binding site 1 out of 2 in the Fluoride Channel Fluc-EC2 Mutant S81T with Bromide


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 1 of Fluoride Channel Fluc-EC2 Mutant S81T with Bromide within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br201

b:107.7
occ:1.00
OG1 A:THR82 3.2 60.8 1.0
O B:THR70 3.9 69.2 1.0
CB B:THR70 3.9 62.8 1.0
CB A:THR82 4.0 60.7 1.0
CA A:THR82 4.0 59.1 1.0
C B:THR70 4.0 65.6 1.0
OG1 A:THR81 4.1 75.3 1.0
N A:THR82 4.1 55.7 1.0
CG2 A:THR82 4.1 59.2 1.0
CD1 B:ILE48 4.1 56.3 1.0
CG1 B:ILE48 4.3 50.4 1.0
CA B:THR70 4.3 61.0 1.0
N B:THR71 4.5 62.8 1.0
C A:THR81 4.5 58.8 1.0
OG1 B:THR70 4.6 61.6 1.0
CB A:THR81 4.6 63.5 1.0
CD1 D:LEU83 4.9 65.6 1.0
O A:THR81 4.9 61.6 1.0
CB B:CYS74 4.9 62.3 1.0
CG2 B:THR70 5.0 64.6 1.0
CA B:THR71 5.0 61.6 1.0

Bromine binding site 2 out of 2 in 7kk8

Go back to Bromine Binding Sites List in 7kk8
Bromine binding site 2 out of 2 in the Fluoride Channel Fluc-EC2 Mutant S81T with Bromide


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 2 of Fluoride Channel Fluc-EC2 Mutant S81T with Bromide within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Br201

b:122.9
occ:1.00
OG1 B:THR82 3.2 68.6 1.0
OG1 B:THR81 3.5 67.5 1.0
N B:THR82 3.7 60.3 1.0
O A:THR70 3.8 74.8 1.0
CA B:THR82 3.8 62.4 1.0
C A:THR70 3.9 69.6 1.0
CB B:THR82 3.9 65.1 1.0
CD1 A:ILE48 4.0 61.6 1.0
CB B:THR81 4.1 63.8 1.0
C B:THR81 4.2 65.2 1.0
CB A:THR70 4.2 66.6 1.0
CG1 A:ILE48 4.2 57.6 1.0
N A:THR71 4.3 66.6 1.0
CA A:THR70 4.3 67.2 1.0
CG2 B:THR82 4.3 52.2 1.0
CB A:CYS74 4.4 64.3 1.0
CA A:THR71 4.6 66.0 1.0
O B:THR81 4.7 65.3 1.0
CG2 B:VAL85 4.7 59.6 1.0
CA B:THR81 4.8 63.0 1.0
CG2 B:THR79 4.9 66.4 1.0
N A:GLY75 4.9 67.8 1.0
OG1 A:THR70 5.0 69.1 1.0

Reference:

B.C.Mcilwain, R.Gundepudi, B.B.Koff, R.B.Stockbridge. The Fluoride Permeation Pathway and Anion Recognition in Fluc Family Fluoride Channels. Elife V. 10 2021.
ISSN: ESSN 2050-084X
PubMed: 34250906
DOI: 10.7554/ELIFE.69482
Page generated: Thu Jul 11 04:01:52 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy