Bromine in PDB 7plz: Cryo-Em Structure of the Actomyosin-V Complex in the Rigor State (Central 3ER/2ER, Young Jasp-Stabilized F-Actin)

Other elements in 7plz:

The structure of Cryo-Em Structure of the Actomyosin-V Complex in the Rigor State (Central 3ER/2ER, Young Jasp-Stabilized F-Actin) also contains other interesting chemical elements:

Magnesium (Mg) 3 atoms

Bromine Binding Sites:

The binding sites of Bromine atom in the Cryo-Em Structure of the Actomyosin-V Complex in the Rigor State (Central 3ER/2ER, Young Jasp-Stabilized F-Actin) (pdb code 7plz). This binding sites where shown within 5.0 Angstroms radius around Bromine atom.
In total 3 binding sites of Bromine where determined in the Cryo-Em Structure of the Actomyosin-V Complex in the Rigor State (Central 3ER/2ER, Young Jasp-Stabilized F-Actin), PDB code: 7plz:
Jump to Bromine binding site number: 1; 2; 3;

Bromine binding site 1 out of 3 in 7plz

Go back to Bromine Binding Sites List in 7plz
Bromine binding site 1 out of 3 in the Cryo-Em Structure of the Actomyosin-V Complex in the Rigor State (Central 3ER/2ER, Young Jasp-Stabilized F-Actin)


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 1 of Cryo-Em Structure of the Actomyosin-V Complex in the Rigor State (Central 3ER/2ER, Young Jasp-Stabilized F-Actin) within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Br404

b:34.5
occ:1.00
BR C:9UE404 0.0 34.5 1.0
C28 C:9UE404 1.9 34.5 1.0
N3 C:9UE404 2.8 34.5 1.0
C21 C:9UE404 2.9 34.5 1.0
CD2 F:HIC73 3.3 31.0 1.0
C19 C:9UE404 3.3 34.5 1.0
C20 C:9UE404 3.5 34.5 1.0
CG F:HIC73 3.8 31.0 1.0
N1 C:9UE404 3.9 34.5 1.0
C27 C:9UE404 4.0 34.5 1.0
CB F:HIC73 4.0 31.0 1.0
C22 C:9UE404 4.1 34.5 1.0
OD2 F:ASP179 4.1 29.8 1.0
NE2 F:HIC73 4.2 31.0 1.0
C8 C:9UE404 4.3 34.5 1.0
C18 C:9UE404 4.5 34.5 1.0
CZ F:HIC73 4.7 31.0 1.0
CG F:ASP179 4.8 29.8 1.0
C9 C:9UE404 4.8 34.5 1.0
ND1 F:HIC73 4.9 31.0 1.0

Bromine binding site 2 out of 3 in 7plz

Go back to Bromine Binding Sites List in 7plz
Bromine binding site 2 out of 3 in the Cryo-Em Structure of the Actomyosin-V Complex in the Rigor State (Central 3ER/2ER, Young Jasp-Stabilized F-Actin)


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 2 of Cryo-Em Structure of the Actomyosin-V Complex in the Rigor State (Central 3ER/2ER, Young Jasp-Stabilized F-Actin) within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Br405

b:40.8
occ:1.00
BR C:9UE405 0.0 40.8 1.0
C28 C:9UE405 1.9 40.8 1.0
N3 C:9UE405 2.8 40.8 1.0
C21 C:9UE405 2.9 40.8 1.0
CD2 G:HIC73 3.3 31.9 1.0
C19 C:9UE405 3.4 40.8 1.0
C20 C:9UE405 3.6 40.8 1.0
CG G:HIC73 3.9 31.9 1.0
C27 C:9UE405 4.0 40.8 1.0
N1 C:9UE405 4.0 40.8 1.0
C22 C:9UE405 4.1 40.8 1.0
OD2 G:ASP179 4.1 32.7 1.0
NE2 G:HIC73 4.1 31.9 1.0
CB G:HIC73 4.1 31.9 1.0
C8 C:9UE405 4.4 40.8 1.0
CZ G:HIC73 4.5 31.9 1.0
CG G:ASP179 4.8 32.7 1.0
C18 C:9UE405 4.8 40.8 1.0
ND1 G:HIC73 4.9 31.9 1.0
C9 C:9UE405 5.0 40.8 1.0
CE1 G:HIC73 5.0 31.9 1.0

Bromine binding site 3 out of 3 in 7plz

Go back to Bromine Binding Sites List in 7plz
Bromine binding site 3 out of 3 in the Cryo-Em Structure of the Actomyosin-V Complex in the Rigor State (Central 3ER/2ER, Young Jasp-Stabilized F-Actin)


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 3 of Cryo-Em Structure of the Actomyosin-V Complex in the Rigor State (Central 3ER/2ER, Young Jasp-Stabilized F-Actin) within 5.0Å range:
probe atom residue distance (Å) B Occ
G:Br401

b:30.7
occ:1.00
BR G:9UE401 0.0 30.7 1.0
C28 G:9UE401 1.9 30.7 1.0
N3 G:9UE401 2.8 30.7 1.0
C21 G:9UE401 2.9 30.7 1.0
CD2 C:HIC73 3.2 29.0 1.0
C19 G:9UE401 3.3 30.7 1.0
C20 G:9UE401 3.6 30.7 1.0
CG C:HIC73 3.8 29.0 1.0
OD2 C:ASP179 3.9 27.3 1.0
N1 G:9UE401 3.9 30.7 1.0
NE2 C:HIC73 4.0 29.0 1.0
C27 G:9UE401 4.0 30.7 1.0
C22 G:9UE401 4.1 30.7 1.0
CB C:HIC73 4.1 29.0 1.0
C8 G:9UE401 4.4 30.7 1.0
C18 G:9UE401 4.4 30.7 1.0
CZ C:HIC73 4.4 29.0 1.0
CG C:ASP179 4.5 27.3 1.0
C9 G:9UE401 4.7 30.7 1.0
ND1 C:HIC73 4.8 29.0 1.0
CE1 C:HIC73 4.8 29.0 1.0
OD1 C:ASP179 4.9 27.3 1.0

Reference:

S.Pospich, H.L.Sweeney, A.Houdusse, S.Raunser. High-Resolution Structures of the Actomyosin-V Complex in Three Nucleotide States Provide Insights Into the Force Generation Mechanism. Elife V. 10 2021.
ISSN: ESSN 2050-084X
PubMed: 34812732
DOI: 10.7554/ELIFE.73724
Page generated: Fri Dec 24 05:06:17 2021

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