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Bromine in PDB 7wnl: Crystal Structure of A Mutant Staphylococcus Equorum Manganese Superoxide Dismutase K38R and A121Y

Enzymatic activity of Crystal Structure of A Mutant Staphylococcus Equorum Manganese Superoxide Dismutase K38R and A121Y

All present enzymatic activity of Crystal Structure of A Mutant Staphylococcus Equorum Manganese Superoxide Dismutase K38R and A121Y:
1.15.1.1;

Protein crystallography data

The structure of Crystal Structure of A Mutant Staphylococcus Equorum Manganese Superoxide Dismutase K38R and A121Y, PDB code: 7wnl was solved by D.S.Retnoningrum, H.Yoshida, A.A.Artarini, W.T.Ismaya, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 44.79 / 1.51
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 100.926, 102.624, 179.017, 90, 90, 90
R / Rfree (%) 17.1 / 24.1

Other elements in 7wnl:

The structure of Crystal Structure of A Mutant Staphylococcus Equorum Manganese Superoxide Dismutase K38R and A121Y also contains other interesting chemical elements:

Manganese (Mn) 4 atoms

Bromine Binding Sites:

The binding sites of Bromine atom in the Crystal Structure of A Mutant Staphylococcus Equorum Manganese Superoxide Dismutase K38R and A121Y (pdb code 7wnl). This binding sites where shown within 5.0 Angstroms radius around Bromine atom.
In total 2 binding sites of Bromine where determined in the Crystal Structure of A Mutant Staphylococcus Equorum Manganese Superoxide Dismutase K38R and A121Y, PDB code: 7wnl:
Jump to Bromine binding site number: 1; 2;

Bromine binding site 1 out of 2 in 7wnl

Go back to Bromine Binding Sites List in 7wnl
Bromine binding site 1 out of 2 in the Crystal Structure of A Mutant Staphylococcus Equorum Manganese Superoxide Dismutase K38R and A121Y


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 1 of Crystal Structure of A Mutant Staphylococcus Equorum Manganese Superoxide Dismutase K38R and A121Y within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br303

b:18.9
occ:0.80
O A:HOH632 3.0 28.6 1.0
N A:GLY11 3.5 13.6 1.0
CB A:ALA14 4.1 17.6 1.0
O A:HOH647 4.2 30.3 1.0
CA A:GLY11 4.2 16.9 1.0
CB A:TYR10 4.3 18.2 1.0
CA A:TYR10 4.4 15.3 1.0
C A:TYR10 4.5 13.6 1.0
O A:HOH544 4.6 25.7 1.0
CA A:ALA14 5.0 15.2 1.0

Bromine binding site 2 out of 2 in 7wnl

Go back to Bromine Binding Sites List in 7wnl
Bromine binding site 2 out of 2 in the Crystal Structure of A Mutant Staphylococcus Equorum Manganese Superoxide Dismutase K38R and A121Y


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 2 of Crystal Structure of A Mutant Staphylococcus Equorum Manganese Superoxide Dismutase K38R and A121Y within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Br303

b:19.3
occ:0.80
O C:HOH637 3.0 24.6 1.0
O B:HOH569 3.4 19.1 1.0
N C:GLY11 3.5 16.7 1.0
O B:HOH529 3.5 23.4 1.0
ND2 B:ASN184 3.7 14.1 1.0
CB C:ALA14 4.1 16.2 1.0
O B:SER180 4.1 14.4 1.0
CA B:ALA181 4.1 14.7 1.0
CA C:GLY11 4.2 16.6 1.0
C B:SER180 4.2 12.7 1.0
N B:ALA181 4.2 15.0 1.0
CB C:TYR10 4.3 17.2 1.0
CA C:TYR10 4.4 16.9 1.0
O B:HOH770 4.4 34.7 1.0
C C:TYR10 4.4 17.4 1.0
CB B:SER180 4.6 15.6 1.0
O B:HOH552 4.6 19.1 1.0
CB B:ALA181 4.7 18.8 1.0
CG B:ASN184 4.8 11.7 1.0
CA C:ALA14 4.9 16.0 1.0
O C:HOH565 4.9 23.9 1.0

Reference:

D.S.Retnoningrum, H.Yoshida, A.A.Artarini, W.T.Ismaya. Crystal Structure of A Mutant Staphylococcus Equorum Manganese Superoxide Dismutase K38R and A121Y To Be Published.
Page generated: Thu Jul 11 04:41:22 2024

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