Bromine in PDB 7zek: Structure of A Hybrid-Type G-Quadruplex with A Snapback Loop (Hybrid 1R')

The binding sites of Bromine atom in the Structure of A Hybrid-Type G-Quadruplex with A Snapback Loop (Hybrid 1R') (pdb code 7zek). This binding sites where shown within 5.0 Angstroms radius around Bromine atom.
In total only one binding site of Bromine was determined in the Structure of A Hybrid-Type G-Quadruplex with A Snapback Loop (Hybrid 1R'), PDB code: 7zek:

Bromine binding site 1 out of 1 in the Structure of A Hybrid-Type G-Quadruplex with A Snapback Loop (Hybrid 1R')


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 1 of Structure of A Hybrid-Type G-Quadruplex with A Snapback Loop (Hybrid 1R') within 5.0Å range: probe atom residue distance (Å) B Occ A:Br6 b:0.0 occ:1.00 BR A:BGM6 0.0 0.0 1.0 C8 A:BGM6 1.9 0.0 1.0 N7 A:BGM6 2.8 0.0 1.0 H1' A:BGM6 2.9 0.0 1.0 N9 A:BGM6 2.9 0.0 1.0 C1' A:BGM6 3.4 0.0 1.0 O4' A:DG7 3.4 0.0 1.0 H2' A:DA11 3.4 0.0 1.0 H8 A:DA11 3.6 0.0 1.0 H21 A:DG12 3.6 0.0 1.0 C8 A:DA11 3.7 0.0 1.0 H2'' A:DA11 3.8 0.0 1.0 H22 A:DG12 3.9 0.0 1.0 C5 A:BGM6 4.0 0.0 1.0 H1' A:DG7 4.0 0.0 1.0 C4 A:BGM6 4.0 0.0 1.0 N7 A:DA11 4.0 0.0 1.0 C2' A:DA11 4.1 0.0 1.0 C1' A:DG7 4.1 0.0 1.0 N3 A:DG7 4.1 0.0 1.0 N9 A:DG7 4.2 0.0 1.0 N2 A:DG12 4.2 0.0 1.0 C4 A:DG7 4.2 0.0 1.0 N9 A:DA11 4.3 0.0 1.0 H5' A:DG7 4.3 0.0 1.0 H4' A:DG7 4.3 0.0 1.0 O4' A:BGM6 4.3 0.0 1.0 C4' A:DG7 4.4 0.0 1.0 H2' A:BGM6 4.4 0.0 1.0 H5'' A:DC10 4.5 0.0 1.0 C2' A:BGM6 4.6 0.0 1.0 H3' A:DC10 4.6 0.0 1.0 C5 A:DA11 4.7 0.0 1.0 C1' A:DA11 4.8 0.0 1.0 C2 A:DG7 4.8 0.0 1.0 C4 A:DA11 4.9 0.0 1.0 C5' A:DG7 4.9 0.0 1.0 OP1 A:DC10 4.9 0.0 1.0 C8 A:DG7 4.9 0.0 1.0 C5 A:DG7 5.0 0.0 1.0

J.Jana, Y.M.Vianney, N.Schroder, K.Weisz. Guiding the Folding of G-Quadruplexes Through Loop Residue Interactions. Nucleic Acids Res. V. 50 7161 2022.
ISSN: ESSN 1362-4962
PubMed: 35758626
DOI: 10.1093/NAR/GKAC549