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Bromine in PDB 8bao: Dysgonamonadaceae Bacterium Crispr Ancillary Nuclease 2

Protein crystallography data

The structure of Dysgonamonadaceae Bacterium Crispr Ancillary Nuclease 2, PDB code: 8bao was solved by A.W.H.Li, A.J.Doherty, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 54.71 / 2.06
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 155.133, 109.429, 63.043, 90, 101.88, 90
R / Rfree (%) 22 / 25.4

Bromine Binding Sites:

The binding sites of Bromine atom in the Dysgonamonadaceae Bacterium Crispr Ancillary Nuclease 2 (pdb code 8bao). This binding sites where shown within 5.0 Angstroms radius around Bromine atom.
In total 2 binding sites of Bromine where determined in the Dysgonamonadaceae Bacterium Crispr Ancillary Nuclease 2, PDB code: 8bao:
Jump to Bromine binding site number: 1; 2;

Bromine binding site 1 out of 2 in 8bao

Go back to Bromine Binding Sites List in 8bao
Bromine binding site 1 out of 2 in the Dysgonamonadaceae Bacterium Crispr Ancillary Nuclease 2


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 1 of Dysgonamonadaceae Bacterium Crispr Ancillary Nuclease 2 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br401

b:55.3
occ:1.00
O A:HOH621 3.6 44.5 1.0
CA A:HIS228 3.7 43.3 1.0
N A:ARG231 3.9 45.7 1.0
CB A:HIS228 3.9 46.7 1.0
CB A:ARG231 3.9 46.1 1.0
C A:HIS228 4.1 46.3 1.0
CB A:ARG230 4.1 41.9 1.0
CD2 A:HIS228 4.2 47.0 1.0
O A:HIS228 4.2 46.6 1.0
CG A:HIS228 4.4 45.4 1.0
N A:ARG230 4.5 42.0 1.0
CA A:ARG231 4.5 44.9 1.0
C A:ARG230 4.6 44.5 1.0
O A:THR227 4.6 42.6 1.0
CA A:ARG230 4.6 44.9 1.0
N A:ILE229 4.9 44.8 1.0
N A:HIS228 5.0 41.0 1.0

Bromine binding site 2 out of 2 in 8bao

Go back to Bromine Binding Sites List in 8bao
Bromine binding site 2 out of 2 in the Dysgonamonadaceae Bacterium Crispr Ancillary Nuclease 2


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 2 of Dysgonamonadaceae Bacterium Crispr Ancillary Nuclease 2 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br402

b:34.6
occ:1.00
NH1 A:ARG97 3.5 35.3 1.0
NH1 B:ARG97 3.6 35.8 1.0
CA B:PHE93 3.8 34.1 1.0
CA A:PHE93 3.8 27.9 1.0
O A:ALA92 3.9 31.0 1.0
OG A:SER96 3.9 35.7 1.0
O B:ALA92 4.0 33.1 1.0
OG B:SER96 4.0 37.7 1.0
C A:ALA92 4.1 30.0 1.0
N A:PHE93 4.1 32.1 1.0
N B:PHE93 4.1 33.5 1.0
C B:ALA92 4.2 34.2 1.0
CD2 B:PHE93 4.4 38.8 1.0
CB B:PHE93 4.4 34.4 1.0
CD1 A:PHE93 4.5 29.4 1.0
CB A:PHE93 4.6 28.7 1.0
CZ A:ARG97 4.6 37.8 1.0
CZ B:ARG97 4.6 39.9 1.0
CB A:ALA92 4.7 27.0 1.0
CG B:PHE93 4.7 36.1 1.0
NH2 A:ARG97 4.8 34.0 1.0
NH2 B:ARG97 4.8 40.6 1.0
CB B:ALA92 4.8 32.5 1.0
C A:PHE93 4.8 31.5 1.0
O A:PHE93 4.8 33.2 1.0
C B:PHE93 4.8 33.7 1.0
O B:PHE93 4.9 33.7 1.0
CB A:SER96 4.9 33.9 1.0
CB B:SER96 4.9 35.2 1.0
CG A:PHE93 4.9 30.4 1.0

Reference:

A.W.H.Li, M.Zabrady, A.J.Doherty. Structure of Dysgonamonadaceae Bacterium Crispr Ancillary Nuclease 2 To Be Published.
Page generated: Thu Jul 11 04:53:39 2024

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