Bromine in PDB 8bao: Dysgonamonadaceae Bacterium Crispr Ancillary Nuclease 2

Protein crystallography data

The structure of Dysgonamonadaceae Bacterium Crispr Ancillary Nuclease 2, PDB code: 8bao was solved by A.W.H.Li, A.J.Doherty, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 54.71 / 2.06
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 155.133, 109.429, 63.043, 90, 101.88, 90
R / Rfree (%) 22 / 25.4

Bromine Binding Sites:

The binding sites of Bromine atom in the Dysgonamonadaceae Bacterium Crispr Ancillary Nuclease 2 (pdb code 8bao). This binding sites where shown within 5.0 Angstroms radius around Bromine atom.
In total 2 binding sites of Bromine where determined in the Dysgonamonadaceae Bacterium Crispr Ancillary Nuclease 2, PDB code: 8bao:
Jump to Bromine binding site number: 1; 2;

Bromine binding site 1 out of 2 in 8bao

Go back to Bromine Binding Sites List in 8bao
Bromine binding site 1 out of 2 in the Dysgonamonadaceae Bacterium Crispr Ancillary Nuclease 2


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 1 of Dysgonamonadaceae Bacterium Crispr Ancillary Nuclease 2 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br401

b:55.3
occ:1.00
O A:HOH621 3.6 44.5 1.0
CA A:HIS228 3.7 43.3 1.0
N A:ARG231 3.9 45.7 1.0
CB A:HIS228 3.9 46.7 1.0
CB A:ARG231 3.9 46.1 1.0
C A:HIS228 4.1 46.3 1.0
CB A:ARG230 4.1 41.9 1.0
CD2 A:HIS228 4.2 47.0 1.0
O A:HIS228 4.2 46.6 1.0
CG A:HIS228 4.4 45.4 1.0
N A:ARG230 4.5 42.0 1.0
CA A:ARG231 4.5 44.9 1.0
C A:ARG230 4.6 44.5 1.0
O A:THR227 4.6 42.6 1.0
CA A:ARG230 4.6 44.9 1.0
N A:ILE229 4.9 44.8 1.0
N A:HIS228 5.0 41.0 1.0

Bromine binding site 2 out of 2 in 8bao

Go back to Bromine Binding Sites List in 8bao
Bromine binding site 2 out of 2 in the Dysgonamonadaceae Bacterium Crispr Ancillary Nuclease 2


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 2 of Dysgonamonadaceae Bacterium Crispr Ancillary Nuclease 2 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br402

b:34.6
occ:1.00
NH1 A:ARG97 3.5 35.3 1.0
NH1 B:ARG97 3.6 35.8 1.0
CA B:PHE93 3.8 34.1 1.0
CA A:PHE93 3.8 27.9 1.0
O A:ALA92 3.9 31.0 1.0
OG A:SER96 3.9 35.7 1.0
O B:ALA92 4.0 33.1 1.0
OG B:SER96 4.0 37.7 1.0
C A:ALA92 4.1 30.0 1.0
N A:PHE93 4.1 32.1 1.0
N B:PHE93 4.1 33.5 1.0
C B:ALA92 4.2 34.2 1.0
CD2 B:PHE93 4.4 38.8 1.0
CB B:PHE93 4.4 34.4 1.0
CD1 A:PHE93 4.5 29.4 1.0
CB A:PHE93 4.6 28.7 1.0
CZ A:ARG97 4.6 37.8 1.0
CZ B:ARG97 4.6 39.9 1.0
CB A:ALA92 4.7 27.0 1.0
CG B:PHE93 4.7 36.1 1.0
NH2 A:ARG97 4.8 34.0 1.0
NH2 B:ARG97 4.8 40.6 1.0
CB B:ALA92 4.8 32.5 1.0
C A:PHE93 4.8 31.5 1.0
O A:PHE93 4.8 33.2 1.0
C B:PHE93 4.8 33.7 1.0
O B:PHE93 4.9 33.7 1.0
CB A:SER96 4.9 33.9 1.0
CB B:SER96 4.9 35.2 1.0
CG A:PHE93 4.9 30.4 1.0

Reference:

A.W.H.Li, M.Zabrady, A.J.Doherty. Structure of Dysgonamonadaceae Bacterium Crispr Ancillary Nuclease 2 To Be Published.
Page generated: Thu Jul 11 04:53:39 2024

Last articles

Zn in 9J0N
Zn in 9J0O
Zn in 9J0P
Zn in 9FJX
Zn in 9EKB
Zn in 9C0F
Zn in 9CAH
Zn in 9CH0
Zn in 9CH3
Zn in 9CH1
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy