Bromine in PDB 8dq1: Quorum-Sensing Receptor Rhlr Bound to Pqse

Bromine Binding Sites:

The binding sites of Bromine atom in the Quorum-Sensing Receptor Rhlr Bound to Pqse (pdb code 8dq1). This binding sites where shown within 5.0 Angstroms radius around Bromine atom.
In total 2 binding sites of Bromine where determined in the Quorum-Sensing Receptor Rhlr Bound to Pqse, PDB code: 8dq1:
Jump to Bromine binding site number: 1; 2;

Bromine binding site 1 out of 2 in 8dq1

Go back to Bromine Binding Sites List in 8dq1
Bromine binding site 1 out of 2 in the Quorum-Sensing Receptor Rhlr Bound to Pqse


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 1 of Quorum-Sensing Receptor Rhlr Bound to Pqse within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Br301

b:120.0
occ:1.00
BR1 C:K5G301 0.0 120.0 1.0
C02 C:K5G301 1.9 120.0 1.0
C03 C:K5G301 2.9 120.0 1.0
C20 C:K5G301 2.9 120.0 1.0
H1 C:K5G301 3.0 120.0 1.0
H4 C:K5G301 3.0 120.0 1.0
HA3 C:GLY62 3.3 102.8 1.0
H C:GLY62 3.3 102.8 1.0
N C:GLY62 3.4 102.8 1.0
HD13 C:LEU69 3.4 118.1 1.0
H C:TYR64 3.4 106.6 1.0
C C:GLY62 3.5 102.8 1.0
O C:GLY62 3.5 102.8 1.0
HD22 C:LEU69 3.5 118.1 1.0
CA C:GLY62 3.6 102.8 1.0
HG11 C:VAL60 3.7 108.8 1.0
HB2 C:LEU69 3.9 118.1 1.0
C C:HIS61 3.9 104.8 1.0
HA C:HIS61 3.9 104.8 1.0
HB2 C:TYR64 4.0 106.6 1.0
N C:THR63 4.1 98.4 1.0
C04 C:K5G301 4.2 120.0 1.0
C19 C:K5G301 4.2 120.0 1.0
N C:TYR64 4.2 106.6 1.0
CD1 C:LEU69 4.3 118.1 1.0
O C:HIS61 4.4 104.8 1.0
HD1 C:TYR64 4.4 106.6 1.0
CA C:HIS61 4.4 104.8 1.0
H C:THR63 4.4 98.4 1.0
CD2 C:LEU69 4.4 118.1 1.0
HA2 C:GLY62 4.5 102.8 1.0
HB2 C:ALA44 4.6 107.8 1.0
HA C:THR63 4.6 98.4 1.0
CG1 C:VAL60 4.6 108.8 1.0
HD11 C:LEU69 4.7 118.1 1.0
CB C:LEU69 4.7 118.1 1.0
C18 C:K5G301 4.7 120.0 1.0
CD1 C:TYR64 4.7 106.6 1.0
CG C:LEU69 4.7 118.1 1.0
CB C:TYR64 4.8 106.6 1.0
CA C:THR63 4.8 98.4 1.0
HG12 C:VAL60 4.8 108.8 1.0
O C:TYR64 4.8 106.6 1.0
HD21 C:LEU69 4.9 118.1 1.0
CG C:TYR64 4.9 106.6 1.0
C C:THR63 4.9 98.4 1.0
HD12 C:LEU69 4.9 118.1 1.0
HB1 C:ALA44 5.0 107.8 1.0

Bromine binding site 2 out of 2 in 8dq1

Go back to Bromine Binding Sites List in 8dq1
Bromine binding site 2 out of 2 in the Quorum-Sensing Receptor Rhlr Bound to Pqse


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 2 of Quorum-Sensing Receptor Rhlr Bound to Pqse within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Br301

b:135.6
occ:1.00
BR1 D:K5G301 0.0 135.6 1.0
HG12 D:VAL60 1.4 120.3 1.0
C02 D:K5G301 1.9 135.6 1.0
HG22 D:VAL60 2.0 120.3 1.0
CG1 D:VAL60 2.2 120.3 1.0
HB D:VAL60 2.3 120.3 1.0
CB D:VAL60 2.4 120.3 1.0
CG2 D:VAL60 2.5 120.3 1.0
HG11 D:VAL60 2.7 120.3 1.0
HG13 D:VAL60 2.8 120.3 1.0
C03 D:K5G301 2.9 135.6 1.0
C20 D:K5G301 2.9 135.6 1.0
HG21 D:VAL60 2.9 120.3 1.0
H1 D:K5G301 3.0 135.6 1.0
H4 D:K5G301 3.0 135.6 1.0
HG23 D:VAL60 3.4 120.3 1.0
CA D:VAL60 4.0 120.3 1.0
HG22 D:THR58 4.1 120.2 1.0
C19 D:K5G301 4.2 135.6 1.0
C04 D:K5G301 4.2 135.6 1.0
HA D:VAL60 4.4 120.3 1.0
CG D:TYR72 4.5 139.2 1.0
HB3 D:TYR72 4.5 139.2 1.0
CD2 D:TYR72 4.5 139.2 1.0
N D:VAL60 4.6 120.3 1.0
HB2 D:TYR72 4.6 139.2 1.0
C18 D:K5G301 4.7 135.6 1.0
CD1 D:TYR72 4.7 139.2 1.0
HD2 D:TYR72 4.7 139.2 1.0
O D:GLU59 4.7 120.2 1.0
C D:VAL60 4.8 120.3 1.0
H15 D:K5G301 4.8 135.6 1.0
H6 D:K5G301 4.8 135.6 1.0
O10 D:K5G301 4.8 135.6 1.0
CB D:TYR72 4.8 139.2 1.0
CE2 D:TYR72 4.9 139.2 1.0
C D:GLU59 4.9 120.2 1.0

Reference:

J.R.Feathers, E.K.Richael, K.A.Simanek, J.C.Fromme, J.E.Paczkowski. Structure of the Rhlr-Pqse Complex From Pseudomonas Aeruginosa Reveals Mechanistic Insights Into Quorum-Sensing Gene Regulation. Structure V. 30 1626 2022.
ISSN: ISSN 0969-2126
PubMed: 36379213
DOI: 10.1016/J.STR.2022.10.008
Page generated: Tue Apr 4 17:46:26 2023

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