Bromine in PDB 8e6t: Human TRPM2 Ion Channel in 1 Mm Br-Adpr
Bromine Binding Sites:
The binding sites of Bromine atom in the Human TRPM2 Ion Channel in 1 Mm Br-Adpr
(pdb code 8e6t). This binding sites where shown within
5.0 Angstroms radius around Bromine atom.
In total 8 binding sites of Bromine where determined in the
Human TRPM2 Ion Channel in 1 Mm Br-Adpr, PDB code: 8e6t:
Jump to Bromine binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
Bromine binding site 1 out
of 8 in 8e6t
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Bromine Binding Sites List in 8e6t
Bromine binding site 1 out
of 8 in the Human TRPM2 Ion Channel in 1 Mm Br-Adpr
Mono view
Stereo pair view
|
A full contact list of Bromine with other atoms in the Br binding
site number 1 of Human TRPM2 Ion Channel in 1 Mm Br-Adpr within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Br1601
b:80.5
occ:1.00
|
BR10
|
A:UOO1601
|
0.0
|
80.5
|
1.0
|
C09
|
A:UOO1601
|
1.9
|
80.5
|
1.0
|
N11
|
A:UOO1601
|
2.9
|
80.5
|
1.0
|
N08
|
A:UOO1601
|
2.9
|
80.5
|
1.0
|
C12
|
A:UOO1601
|
3.3
|
80.5
|
1.0
|
O37
|
A:UOO1601
|
3.4
|
80.5
|
1.0
|
O
|
A:ASN273
|
3.9
|
38.5
|
1.0
|
CE2
|
A:TYR295
|
4.1
|
57.2
|
1.0
|
OG1
|
A:THR275
|
4.1
|
43.0
|
1.0
|
C06
|
A:UOO1601
|
4.1
|
80.5
|
1.0
|
C07
|
A:UOO1601
|
4.1
|
80.5
|
1.0
|
OH
|
A:TYR295
|
4.2
|
57.2
|
1.0
|
CZ
|
A:TYR295
|
4.6
|
57.2
|
1.0
|
C13
|
A:UOO1601
|
4.9
|
80.5
|
1.0
|
C
|
A:ASN273
|
5.0
|
38.5
|
1.0
|
|
Bromine binding site 2 out
of 8 in 8e6t
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Bromine Binding Sites List in 8e6t
Bromine binding site 2 out
of 8 in the Human TRPM2 Ion Channel in 1 Mm Br-Adpr
Mono view
Stereo pair view
|
A full contact list of Bromine with other atoms in the Br binding
site number 2 of Human TRPM2 Ion Channel in 1 Mm Br-Adpr within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Br1602
b:127.8
occ:1.00
|
BR10
|
A:UOO1602
|
0.0
|
127.8
|
1.0
|
C09
|
A:UOO1602
|
1.9
|
127.8
|
1.0
|
N11
|
A:UOO1602
|
2.9
|
127.8
|
1.0
|
N08
|
A:UOO1602
|
2.9
|
127.8
|
1.0
|
O14
|
A:UOO1602
|
3.1
|
127.8
|
1.0
|
C13
|
A:UOO1602
|
3.3
|
127.8
|
1.0
|
C12
|
A:UOO1602
|
3.4
|
127.8
|
1.0
|
CG
|
A:PRO1432
|
3.5
|
65.5
|
1.0
|
CE1
|
A:TYR1485
|
3.7
|
74.4
|
1.0
|
CD1
|
A:TYR1485
|
4.1
|
74.4
|
1.0
|
C07
|
A:UOO1602
|
4.1
|
127.8
|
1.0
|
C06
|
A:UOO1602
|
4.1
|
127.8
|
1.0
|
CB
|
A:PRO1432
|
4.4
|
65.5
|
1.0
|
CZ
|
A:TYR1485
|
4.5
|
74.4
|
1.0
|
CD
|
A:PRO1432
|
4.6
|
65.5
|
1.0
|
O37
|
A:UOO1602
|
4.7
|
127.8
|
1.0
|
OH
|
A:TYR1485
|
4.8
|
74.4
|
1.0
|
C15
|
A:UOO1602
|
4.9
|
127.8
|
1.0
|
|
Bromine binding site 3 out
of 8 in 8e6t
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Bromine Binding Sites List in 8e6t
Bromine binding site 3 out
of 8 in the Human TRPM2 Ion Channel in 1 Mm Br-Adpr
Mono view
Stereo pair view
|
A full contact list of Bromine with other atoms in the Br binding
site number 3 of Human TRPM2 Ion Channel in 1 Mm Br-Adpr within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Br1601
b:83.7
occ:1.00
|
BR10
|
B:UOO1601
|
0.0
|
83.7
|
1.0
|
C09
|
B:UOO1601
|
1.9
|
83.7
|
1.0
|
N11
|
B:UOO1601
|
2.9
|
83.7
|
1.0
|
N08
|
B:UOO1601
|
2.9
|
83.7
|
1.0
|
C12
|
B:UOO1601
|
3.3
|
83.7
|
1.0
|
O37
|
B:UOO1601
|
3.4
|
83.7
|
1.0
|
O
|
B:ASN273
|
3.9
|
50.3
|
1.0
|
CE2
|
B:TYR295
|
4.1
|
59.7
|
1.0
|
OG1
|
B:THR275
|
4.1
|
59.1
|
1.0
|
C06
|
B:UOO1601
|
4.1
|
83.7
|
1.0
|
C07
|
B:UOO1601
|
4.1
|
83.7
|
1.0
|
OH
|
B:TYR295
|
4.2
|
59.7
|
1.0
|
CZ
|
B:TYR295
|
4.6
|
59.7
|
1.0
|
C13
|
B:UOO1601
|
4.9
|
83.7
|
1.0
|
C
|
B:ASN273
|
5.0
|
50.3
|
1.0
|
|
Bromine binding site 4 out
of 8 in 8e6t
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Bromine Binding Sites List in 8e6t
Bromine binding site 4 out
of 8 in the Human TRPM2 Ion Channel in 1 Mm Br-Adpr
Mono view
Stereo pair view
|
A full contact list of Bromine with other atoms in the Br binding
site number 4 of Human TRPM2 Ion Channel in 1 Mm Br-Adpr within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Br1602
b:133.0
occ:1.00
|
BR10
|
B:UOO1602
|
0.0
|
133.0
|
1.0
|
C09
|
B:UOO1602
|
1.9
|
133.0
|
1.0
|
N08
|
B:UOO1602
|
2.9
|
133.0
|
1.0
|
N11
|
B:UOO1602
|
2.9
|
133.0
|
1.0
|
O14
|
B:UOO1602
|
3.1
|
133.0
|
1.0
|
C13
|
B:UOO1602
|
3.3
|
133.0
|
1.0
|
C12
|
B:UOO1602
|
3.4
|
133.0
|
1.0
|
CG
|
B:PRO1432
|
3.5
|
69.6
|
1.0
|
CE1
|
B:TYR1485
|
3.7
|
72.6
|
1.0
|
CD1
|
B:TYR1485
|
4.1
|
72.6
|
1.0
|
C07
|
B:UOO1602
|
4.1
|
133.0
|
1.0
|
C06
|
B:UOO1602
|
4.1
|
133.0
|
1.0
|
CB
|
B:PRO1432
|
4.4
|
69.6
|
1.0
|
CZ
|
B:TYR1485
|
4.5
|
72.6
|
1.0
|
CD
|
B:PRO1432
|
4.6
|
69.6
|
1.0
|
O37
|
B:UOO1602
|
4.7
|
133.0
|
1.0
|
OH
|
B:TYR1485
|
4.8
|
72.6
|
1.0
|
C15
|
B:UOO1602
|
4.9
|
133.0
|
1.0
|
|
Bromine binding site 5 out
of 8 in 8e6t
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Bromine Binding Sites List in 8e6t
Bromine binding site 5 out
of 8 in the Human TRPM2 Ion Channel in 1 Mm Br-Adpr
Mono view
Stereo pair view
|
A full contact list of Bromine with other atoms in the Br binding
site number 5 of Human TRPM2 Ion Channel in 1 Mm Br-Adpr within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Br1601
b:77.0
occ:1.00
|
BR10
|
C:UOO1601
|
0.0
|
77.0
|
1.0
|
C09
|
C:UOO1601
|
1.9
|
77.0
|
1.0
|
N11
|
C:UOO1601
|
2.9
|
77.0
|
1.0
|
N08
|
C:UOO1601
|
2.9
|
77.0
|
1.0
|
C12
|
C:UOO1601
|
3.3
|
77.0
|
1.0
|
O37
|
C:UOO1601
|
3.4
|
77.0
|
1.0
|
O
|
C:ASN273
|
3.9
|
44.0
|
1.0
|
CE2
|
C:TYR295
|
4.1
|
61.4
|
1.0
|
OG1
|
C:THR275
|
4.1
|
55.9
|
1.0
|
C06
|
C:UOO1601
|
4.1
|
77.0
|
1.0
|
C07
|
C:UOO1601
|
4.1
|
77.0
|
1.0
|
OH
|
C:TYR295
|
4.2
|
61.4
|
1.0
|
CZ
|
C:TYR295
|
4.6
|
61.4
|
1.0
|
C13
|
C:UOO1601
|
4.9
|
77.0
|
1.0
|
C
|
C:ASN273
|
5.0
|
44.0
|
1.0
|
|
Bromine binding site 6 out
of 8 in 8e6t
Go back to
Bromine Binding Sites List in 8e6t
Bromine binding site 6 out
of 8 in the Human TRPM2 Ion Channel in 1 Mm Br-Adpr
Mono view
Stereo pair view
|
A full contact list of Bromine with other atoms in the Br binding
site number 6 of Human TRPM2 Ion Channel in 1 Mm Br-Adpr within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Br1602
b:130.8
occ:1.00
|
BR10
|
C:UOO1602
|
0.0
|
130.8
|
1.0
|
C09
|
C:UOO1602
|
1.9
|
130.8
|
1.0
|
N11
|
C:UOO1602
|
2.9
|
130.8
|
1.0
|
N08
|
C:UOO1602
|
2.9
|
130.8
|
1.0
|
O14
|
C:UOO1602
|
3.1
|
130.8
|
1.0
|
C13
|
C:UOO1602
|
3.3
|
130.8
|
1.0
|
C12
|
C:UOO1602
|
3.4
|
130.8
|
1.0
|
CG
|
C:PRO1432
|
3.5
|
69.1
|
1.0
|
CE1
|
C:TYR1485
|
3.7
|
75.8
|
1.0
|
CD1
|
C:TYR1485
|
4.1
|
75.8
|
1.0
|
C07
|
C:UOO1602
|
4.1
|
130.8
|
1.0
|
C06
|
C:UOO1602
|
4.1
|
130.8
|
1.0
|
CB
|
C:PRO1432
|
4.4
|
69.1
|
1.0
|
CZ
|
C:TYR1485
|
4.5
|
75.8
|
1.0
|
CD
|
C:PRO1432
|
4.6
|
69.1
|
1.0
|
O37
|
C:UOO1602
|
4.7
|
130.8
|
1.0
|
OH
|
C:TYR1485
|
4.9
|
75.8
|
1.0
|
C15
|
C:UOO1602
|
4.9
|
130.8
|
1.0
|
|
Bromine binding site 7 out
of 8 in 8e6t
Go back to
Bromine Binding Sites List in 8e6t
Bromine binding site 7 out
of 8 in the Human TRPM2 Ion Channel in 1 Mm Br-Adpr
Mono view
Stereo pair view
|
A full contact list of Bromine with other atoms in the Br binding
site number 7 of Human TRPM2 Ion Channel in 1 Mm Br-Adpr within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Br1601
b:78.4
occ:1.00
|
BR10
|
D:UOO1601
|
0.0
|
78.4
|
1.0
|
C09
|
D:UOO1601
|
1.9
|
78.4
|
1.0
|
N11
|
D:UOO1601
|
2.9
|
78.4
|
1.0
|
N08
|
D:UOO1601
|
2.9
|
78.4
|
1.0
|
C12
|
D:UOO1601
|
3.3
|
78.4
|
1.0
|
O37
|
D:UOO1601
|
3.4
|
78.4
|
1.0
|
O
|
D:ASN273
|
3.9
|
53.5
|
1.0
|
CE2
|
D:TYR295
|
4.1
|
61.3
|
1.0
|
C06
|
D:UOO1601
|
4.1
|
78.4
|
1.0
|
OG1
|
D:THR275
|
4.1
|
61.2
|
1.0
|
C07
|
D:UOO1601
|
4.1
|
78.4
|
1.0
|
OH
|
D:TYR295
|
4.2
|
61.3
|
1.0
|
CZ
|
D:TYR295
|
4.6
|
61.3
|
1.0
|
C13
|
D:UOO1601
|
4.9
|
78.4
|
1.0
|
C
|
D:ASN273
|
5.0
|
53.5
|
1.0
|
|
Bromine binding site 8 out
of 8 in 8e6t
Go back to
Bromine Binding Sites List in 8e6t
Bromine binding site 8 out
of 8 in the Human TRPM2 Ion Channel in 1 Mm Br-Adpr
Mono view
Stereo pair view
|
A full contact list of Bromine with other atoms in the Br binding
site number 8 of Human TRPM2 Ion Channel in 1 Mm Br-Adpr within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Br1602
b:139.8
occ:1.00
|
BR10
|
D:UOO1602
|
0.0
|
139.8
|
1.0
|
C09
|
D:UOO1602
|
1.9
|
139.8
|
1.0
|
N11
|
D:UOO1602
|
2.9
|
139.8
|
1.0
|
N08
|
D:UOO1602
|
2.9
|
139.8
|
1.0
|
O14
|
D:UOO1602
|
3.1
|
139.8
|
1.0
|
C13
|
D:UOO1602
|
3.3
|
139.8
|
1.0
|
C12
|
D:UOO1602
|
3.4
|
139.8
|
1.0
|
CG
|
D:PRO1432
|
3.5
|
70.8
|
1.0
|
CE1
|
D:TYR1485
|
3.7
|
75.0
|
1.0
|
CD1
|
D:TYR1485
|
4.1
|
75.0
|
1.0
|
C07
|
D:UOO1602
|
4.1
|
139.8
|
1.0
|
C06
|
D:UOO1602
|
4.1
|
139.8
|
1.0
|
CB
|
D:PRO1432
|
4.4
|
70.8
|
1.0
|
CZ
|
D:TYR1485
|
4.5
|
75.0
|
1.0
|
CD
|
D:PRO1432
|
4.6
|
70.8
|
1.0
|
O37
|
D:UOO1602
|
4.7
|
139.8
|
1.0
|
OH
|
D:TYR1485
|
4.9
|
75.0
|
1.0
|
C15
|
D:UOO1602
|
4.9
|
139.8
|
1.0
|
|
Reference:
L.Wang,
T.-M.Fu.
A Unified Mechanism For Human TRPM2 Activation, Desensitization and Inhibition To Be Published.
Page generated: Sat Sep 28 08:39:01 2024
|