Bromine in PDB 8psc: Three-Layered Basket-Type G-Quadruplex From A G-Rich Sequence with Five G-Runs

The binding sites of Bromine atom in the Three-Layered Basket-Type G-Quadruplex From A G-Rich Sequence with Five G-Runs (pdb code 8psc). This binding sites where shown within 5.0 Angstroms radius around Bromine atom.
In total only one binding site of Bromine was determined in the Three-Layered Basket-Type G-Quadruplex From A G-Rich Sequence with Five G-Runs, PDB code: 8psc:

Bromine binding site 1 out of 1 in the Three-Layered Basket-Type G-Quadruplex From A G-Rich Sequence with Five G-Runs


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 1 of Three-Layered Basket-Type G-Quadruplex From A G-Rich Sequence with Five G-Runs within 5.0Å range: probe atom residue distance (Å) B Occ A:Br3 b:0.0 occ:1.00 BR A:BGM3 0.0 0.0 1.0 C8 A:BGM3 1.9 0.0 1.0 N7 A:BGM3 2.8 0.0 1.0 H1' A:BGM3 2.8 0.0 1.0 N9 A:BGM3 2.9 0.0 1.0 C1' A:BGM3 3.4 0.0 1.0 H21 A:DG8 3.5 0.0 1.0 O4' A:DG4 3.8 0.0 1.0 H22 A:DG8 3.9 0.0 1.0 C5 A:BGM3 4.0 0.0 1.0 N3 A:DG4 4.0 0.0 1.0 C4 A:BGM3 4.0 0.0 1.0 N2 A:DG8 4.1 0.0 1.0 H2' A:BGM3 4.2 0.0 1.0 C4 A:DG4 4.2 0.0 1.0 N9 A:DG4 4.4 0.0 1.0 O4' A:BGM3 4.4 0.0 1.0 H22 A:DG9 4.4 0.0 1.0 C2' A:BGM3 4.4 0.0 1.0 C1' A:DG4 4.6 0.0 1.0 C2 A:DG4 4.7 0.0 1.0 H1' A:DG4 4.7 0.0 1.0 H5' A:DG4 4.8 0.0 1.0 H22 A:DG4 4.8 0.0 1.0 N2 A:DG9 4.9 0.0 1.0 H4' A:DG4 4.9 0.0 1.0 C4' A:DG4 4.9 0.0 1.0

Y.M.Vianney, N.Schroeder, J.Jana, G.Chojetzki, K.Weisz. Showcasing Different G-Quadruplex Folds of A G-Rich Sequence: Between Rule-Based Prediction and Butterfly Effect J.Am.Chem.Soc. 2023.
ISSN: ESSN 1520-5126
DOI: 10.1021/JACS.3C08336