Bromine in PDB 8pse: (3+1) Hybrid G-Quadruplex From A G-Rich Sequence with Five G-Runs

The binding sites of Bromine atom in the (3+1) Hybrid G-Quadruplex From A G-Rich Sequence with Five G-Runs (pdb code 8pse). This binding sites where shown within 5.0 Angstroms radius around Bromine atom.
In total only one binding site of Bromine was determined in the (3+1) Hybrid G-Quadruplex From A G-Rich Sequence with Five G-Runs, PDB code: 8pse:

Bromine binding site 1 out of 1 in the (3+1) Hybrid G-Quadruplex From A G-Rich Sequence with Five G-Runs


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 1 of (3+1) Hybrid G-Quadruplex From A G-Rich Sequence with Five G-Runs within 5.0Å range: probe atom residue distance (Å) B Occ A:Br15 b:0.0 occ:1.00 BR A:BGM15 0.0 0.0 1.0 C8 A:BGM15 1.9 0.0 1.0 N7 A:BGM15 2.8 0.0 1.0 H1' A:BGM15 2.9 0.0 1.0 N9 A:BGM15 2.9 0.0 1.0 H71 A:DT17 3.1 0.0 1.0 H4' A:DT23 3.1 0.0 1.0 O4' A:DG16 3.3 0.0 1.0 H22 A:DG22 3.3 0.0 1.0 C1' A:BGM15 3.4 0.0 1.0 O6 A:DG12 3.5 0.0 1.0 O4 A:DT17 3.6 0.0 1.0 H21 A:DG21 3.7 0.0 1.0 N7 A:DG12 3.7 0.0 1.0 H4' A:DG16 3.7 0.0 1.0 H5' A:DG16 3.8 0.0 1.0 O4' A:DT23 3.8 0.0 1.0 H22 A:DG21 3.9 0.0 1.0 C4' A:DT23 3.9 0.0 1.0 C5 A:BGM15 3.9 0.0 1.0 N2 A:DG22 4.0 0.0 1.0 C4' A:DG16 4.0 0.0 1.0 C4 A:BGM15 4.0 0.0 1.0 H1' A:DG16 4.0 0.0 1.0 H1' A:DT23 4.1 0.0 1.0 C7 A:DT17 4.1 0.0 1.0 C1' A:DG16 4.1 0.0 1.0 C6 A:DG12 4.2 0.0 1.0 N2 A:DG21 4.2 0.0 1.0 C5 A:DG12 4.2 0.0 1.0 H5' A:DT23 4.3 0.0 1.0 C4 A:DT17 4.3 0.0 1.0 H21 A:DG22 4.4 0.0 1.0 O4' A:BGM15 4.4 0.0 1.0 C5' A:DG16 4.4 0.0 1.0 H2' A:BGM15 4.5 0.0 1.0 H73 A:DT17 4.5 0.0 1.0 N9 A:DG16 4.5 0.0 1.0 C1' A:DT23 4.5 0.0 1.0 N3 A:DG22 4.5 0.0 1.0 C5 A:DT17 4.6 0.0 1.0 C2' A:BGM15 4.6 0.0 1.0 C2 A:DG22 4.6 0.0 1.0 C5' A:DT23 4.7 0.0 1.0 H8 A:DG14 4.7 0.0 1.0 H72 A:DT17 4.8 0.0 1.0 C8 A:DG12 4.8 0.0 1.0 H8 A:DG16 4.9 0.0 1.0 C8 A:DG16 4.9 0.0 1.0 O3' A:DT23 5.0 0.0 1.0

Y.M.Vianney, N.Schroeder, J.Jana, G.Chojetzki, K.Weisz. Showcasing Different G-Quadruplex Folds of A G-Rich Sequence: Between Rule-Based Prediction and Butterfly Effect J.Am.Chem.Soc. 2023.
ISSN: ESSN 1520-5126
DOI: 10.1021/JACS.3C08336