Bromine in PDB 8trn: Actin 1 From T. Gondii in Filaments Bound to Mgadp and Jasplakinolide

The structure of Actin 1 From T. Gondii in Filaments Bound to Mgadp and Jasplakinolide also contains other interesting chemical elements:

Magnesium

(Mg)

3 atoms

The binding sites of Bromine atom in the Actin 1 From T. Gondii in Filaments Bound to Mgadp and Jasplakinolide (pdb code 8trn). This binding sites where shown within 5.0 Angstroms radius around Bromine atom.
In total 3 binding sites of Bromine where determined in the Actin 1 From T. Gondii in Filaments Bound to Mgadp and Jasplakinolide, PDB code: 8trn:
Jump to Bromine binding site number: 1; 2; 3;

Bromine binding site 1 out of 3 in the Actin 1 From T. Gondii in Filaments Bound to Mgadp and Jasplakinolide


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 1 of Actin 1 From T. Gondii in Filaments Bound to Mgadp and Jasplakinolide within 5.0Å range: probe atom residue distance (Å) B Occ A:Br403 b:125.4 occ:1.00 BR A:9UE403 0.0 125.4 1.0 C28 A:9UE403 1.9 65.8 1.0 C21 A:9UE403 2.9 60.5 1.0 N3 A:9UE403 2.9 63.4 1.0 C20 A:9UE403 3.4 61.8 1.0 C19 A:9UE403 3.6 61.6 1.0 ND1 B:HIS74 3.7 52.9 1.0 N1 A:9UE403 3.7 62.6 1.0 C18 A:9UE403 3.8 57.3 1.0 C27 A:9UE403 4.1 65.9 1.0 C22 A:9UE403 4.1 61.3 1.0 OD2 B:ASP180 4.1 56.0 1.0 C8 A:9UE403 4.2 58.5 1.0 C9 A:9UE403 4.2 60.4 1.0 CE1 B:HIS74 4.2 53.1 1.0 CG B:HIS74 4.5 51.3 1.0 C10 A:9UE403 4.6 57.4 1.0 O3 A:9UE403 4.8 68.3 1.0 CB B:HIS74 4.8 43.5 1.0 OE1 B:GLU73 4.9 51.7 1.0

Bromine binding site 2 out of 3 in the Actin 1 From T. Gondii in Filaments Bound to Mgadp and Jasplakinolide


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 2 of Actin 1 From T. Gondii in Filaments Bound to Mgadp and Jasplakinolide within 5.0Å range: probe atom residue distance (Å) B Occ B:Br403 b:120.5 occ:1.00 BR B:9UE403 0.0 120.5 1.0 C28 B:9UE403 1.9 59.9 1.0 C21 B:9UE403 2.9 53.9 1.0 N3 B:9UE403 2.9 59.1 1.0 C20 B:9UE403 3.4 56.1 1.0 C19 B:9UE403 3.6 57.8 1.0 N1 B:9UE403 3.7 54.7 1.0 C18 B:9UE403 3.8 55.1 1.0 C27 B:9UE403 4.1 59.6 1.0 C22 B:9UE403 4.1 55.4 1.0 C8 B:9UE403 4.2 52.6 1.0 C9 B:9UE403 4.2 53.7 1.0 C10 B:9UE403 4.6 51.8 1.0 O3 B:9UE403 4.8 65.3 1.0

Bromine binding site 3 out of 3 in the Actin 1 From T. Gondii in Filaments Bound to Mgadp and Jasplakinolide


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 3 of Actin 1 From T. Gondii in Filaments Bound to Mgadp and Jasplakinolide within 5.0Å range: probe atom residue distance (Å) B Occ C:Br403 b:124.7 occ:1.00 BR C:9UE403 0.0 124.7 1.0 C28 C:9UE403 1.9 63.9 1.0 C21 C:9UE403 2.9 59.0 1.0 N3 C:9UE403 2.9 61.6 1.0 C20 C:9UE403 3.4 62.0 1.0 C19 C:9UE403 3.6 63.5 1.0 ND1 A:HIS74 3.7 60.4 1.0 N1 C:9UE403 3.7 61.4 1.0 C18 C:9UE403 3.8 57.2 1.0 C27 C:9UE403 4.1 64.2 1.0 C22 C:9UE403 4.1 59.6 1.0 OD2 A:ASP180 4.1 67.5 1.0 CE1 A:HIS74 4.2 60.4 1.0 C8 C:9UE403 4.2 59.3 1.0 C9 C:9UE403 4.2 58.2 1.0 CG A:HIS74 4.5 54.8 1.0 C10 C:9UE403 4.6 57.5 1.0 O3 C:9UE403 4.8 67.9 1.0 CB A:HIS74 4.8 46.6 1.0 OE1 A:GLU73 4.9 58.3 1.0

K.L.Hvorecny, T.E.Sladewski, E.M.De La Cruz, J.M.Kollman, A.T.Heaslip. Toxoplasma Gondii Actin Filaments Are Tuned For Rapid Disassembly and Turnover. Nat Commun V. 15 1840 2024.
ISSN: ESSN 2041-1723
PubMed: 38418447
DOI: 10.1038/S41467-024-46111-3