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Bromine in PDB 1kfo: Crystal Structure of An Rna Helix Recognized By A Zinc- Finger Protein: An 18 Base Pair Duplex at 1.6 Resolution

Protein crystallography data

The structure of Crystal Structure of An Rna Helix Recognized By A Zinc- Finger Protein: An 18 Base Pair Duplex at 1.6 Resolution, PDB code: 1kfo was solved by S.Lima, J.Hildenbrand, A.Korostelev, S.Hattman, H.Li, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 16.69 / 1.60
Space group P 63 2 2
Cell size a, b, c (Å), α, β, γ (°) 45.336, 45.336, 95.129, 90.00, 90.00, 120.00
R / Rfree (%) 26 / 28.8

Bromine Binding Sites:

The binding sites of Bromine atom in the Crystal Structure of An Rna Helix Recognized By A Zinc- Finger Protein: An 18 Base Pair Duplex at 1.6 Resolution (pdb code 1kfo). This binding sites where shown within 5.0 Angstroms radius around Bromine atom.
In total only one binding site of Bromine was determined in the Crystal Structure of An Rna Helix Recognized By A Zinc- Finger Protein: An 18 Base Pair Duplex at 1.6 Resolution, PDB code: 1kfo:

Bromine binding site 1 out of 1 in 1kfo

Go back to Bromine Binding Sites List in 1kfo
Bromine binding site 1 out of 1 in the Crystal Structure of An Rna Helix Recognized By A Zinc- Finger Protein: An 18 Base Pair Duplex at 1.6 Resolution


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 1 of Crystal Structure of An Rna Helix Recognized By A Zinc- Finger Protein: An 18 Base Pair Duplex at 1.6 Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br16

b:29.9
occ:1.00
BR A:5BU16 0.0 29.9 1.0
C5 A:5BU16 1.7 26.2 1.0
C6 A:5BU16 2.7 25.8 1.0
C4 A:5BU16 2.7 25.7 1.0
O4 A:5BU16 3.1 25.3 1.0
OP2 A:5BU16 3.5 28.6 1.0
N7 A:A15 3.6 19.7 1.0
C8 A:A15 3.6 21.0 1.0
O A:HOH23 3.7 35.0 1.0
C5 A:A15 3.8 21.9 1.0
N9 A:A15 3.9 22.2 1.0
N4 A:C17 3.9 28.3 1.0
O A:HOH55 4.0 45.0 1.0
O A:HOH53 4.0 40.5 1.0
N3 A:5BU16 4.0 25.8 1.0
N1 A:5BU16 4.0 29.2 1.0
C4 A:A15 4.0 21.5 1.0
C3' A:A15 4.1 26.8 1.0
O A:HOH35 4.2 42.2 1.0
C2' A:A15 4.3 26.4 1.0
O5' A:5BU16 4.4 31.7 1.0
C5 A:C17 4.4 29.5 1.0
C4 A:C17 4.4 29.7 1.0
P A:5BU16 4.5 28.6 1.0
C2 A:5BU16 4.5 28.6 1.0
C6 A:A15 4.6 20.1 1.0
O5' A:A15 4.6 24.6 1.0
C1' A:A15 4.6 25.3 1.0
N3 A:A15 4.8 25.1 1.0
O3' A:A15 4.8 29.2 1.0
OP2 A:A15 4.9 28.7 1.0

Reference:

S.Lima, J.Hildenbrand, A.Korostelev, S.Hattman, H.Li. Crystal Structure of An Rna Helix Recognized By A Zinc-Finger Protein: An 18-Bp Duplex at 1.6 A Resolution. Rna V. 8 924 2002.
ISSN: ISSN 1355-8382
PubMed: 12166647
DOI: 10.1017/S1355838202028893
Page generated: Wed Jul 10 16:47:57 2024

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