Chemical elements
  Bromine
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    PDB 101d-1f5m
    PDB 1f6j-1kdh
    PDB 1kfo-1o3l
      1kfo
      1kgj
      1kh6
      1ki4
      1ki8
      1kjl
      1kuv
      1l0z
      1l1g
      1l9m
      1lnt
      1lww
      1lz9
      1m3d
      1m5c
      1m5d
      1m66
      1m67
      1m69
      1m9r
      1m9t
      1mdg
      1mgy
      1mhk
      1mqh
      1mxc
      1mxu
      1my3
      1n0r
      1n11
      1n1g
      1n7a
      1n7b
      1n8b
      1n8u
      1n8v
      1n9k
      1nud
      1nuf
      1o27
      1o2u
      1o2v
      1o2w
      1o2x
      1o2y
      1o3h
      1o3i
      1o3j
      1o3k
      1o3l
    PDB 1o5m-1to3
    PDB 1uhj-1zpz
    PDB 1zw9-2fkk
    PDB 2fpr-2j9m
    PDB 2ja5-2qfe
    PDB 2qgd-2wb9
    PDB 2wbb-3biy
    PDB 3bm9-3eki
    PDB 3en9-3hvo
    PDB 3hzw-3lbz
    PDB 3ld5-3ot3
    PDB 3oyp-4de3
    PDB 4dey-9est

Bromine in the structure of An Alternating Antiparallel Octaplex in An Rna Crystal Structure (pdb 1mdg)






The binding sites of Bromine atom in the structure of An Alternating Antiparallel Octaplex in An Rna Crystal Structure (pdb code 1mdg). This binding sites where shown with 5.0 Angstroms radius around Bromine atom.
The 1mdg structure was solved by B.C.PAN, Y.XIONG, K.SHI, M.SUNDARALINGAM, with X-Ray Crystallography technique, brief refinement statistics is given in the table below:
Resolution (A)30.0-1.5
Space groupI422
a (A)35.956
b (A)35.956
c (A)38.045
alpha (°)90.00
beta (°)90.00
gamma (°)90.00
Rfactor (%)17.2
Rfree (%)19.4


Bromine Binding Sites:

Bromine binding site 1 out of 1 in 1mdg


Bromine binding site 1 out of 1 in 1mdg
Click to enlarge
stereopicture of Bromine binding site 1 out of 1 in 1mdg
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Bromine in the PDB 1mdg. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Bromine atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: U1, A: Bgm2, A: A3, A: Hoh309, A: Hoh316,

conact list:


AtomAtomDistance (A)
BrO2' A:U14.22
BrN9 A:Bgm22.89
BrC3' A:Bgm24.33
BrC8 A:Bgm21.88
BrC5 A:Bgm23.95
BrC1' A:Bgm23.38
BrN7 A:Bgm22.80
BrO4' A:Bgm23.28
BrC4 A:Bgm24.02
BrC5' A:Bgm23.76
BrC2' A:Bgm23.50
BrC4' A:Bgm23.97
BrBR A:Bgm20.00
BrC8 A:A34.75
BrC5 A:A34.72
BrN6 A:A34.88
BrN7 A:A34.15
BrO A:Hoh3093.05
BrO A:Hoh3164.39

interactive model:




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