Atomistry » Bromine » PDB 1m9t-1p1y » 1mxc
Atomistry »
  Bromine »
    PDB 1m9t-1p1y »
      1mxc »

Bromine in PDB 1mxc: S-Adenosylmethionine Synthetase with 8-Br-Adp

Enzymatic activity of S-Adenosylmethionine Synthetase with 8-Br-Adp

All present enzymatic activity of S-Adenosylmethionine Synthetase with 8-Br-Adp:
2.5.1.6;

Protein crystallography data

The structure of S-Adenosylmethionine Synthetase with 8-Br-Adp, PDB code: 1mxc was solved by F.Takusagawa, S.Kamitori, G.D.Markham, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 10.00 / 3.00
Space group P 62 2 2
Cell size a, b, c (Å), α, β, γ (°) 128.900, 128.900, 139.800, 90.00, 90.00, 120.00
R / Rfree (%) 18.7 / 25.9

Other elements in 1mxc:

The structure of S-Adenosylmethionine Synthetase with 8-Br-Adp also contains other interesting chemical elements:

Magnesium (Mg) 2 atoms
Potassium (K) 2 atoms

Bromine Binding Sites:

The binding sites of Bromine atom in the S-Adenosylmethionine Synthetase with 8-Br-Adp (pdb code 1mxc). This binding sites where shown within 5.0 Angstroms radius around Bromine atom.
In total only one binding site of Bromine was determined in the S-Adenosylmethionine Synthetase with 8-Br-Adp, PDB code: 1mxc:

Bromine binding site 1 out of 1 in 1mxc

Go back to Bromine Binding Sites List in 1mxc
Bromine binding site 1 out of 1 in the S-Adenosylmethionine Synthetase with 8-Br-Adp


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 1 of S-Adenosylmethionine Synthetase with 8-Br-Adp within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br385

b:94.9
occ:1.00
BR8 A:ABP385 0.0 94.9 1.0
C8 A:ABP385 1.9 93.4 1.0
N7 A:ABP385 2.8 91.0 1.0
N9 A:ABP385 3.0 99.9 1.0
C2' A:ABP385 3.5 0.9 1.0
C1' A:ABP385 3.8 0.6 1.0
C5 A:ABP385 4.0 92.9 1.0
C4 A:ABP385 4.1 93.2 1.0
C3' A:ABP385 4.3 0.6 1.0
O2' A:ABP385 4.4 0.8 1.0
O4' A:ABP385 4.7 0.4 1.0

Reference:

F.Takusagawa, S.Kamitori, G.D.Markham. Structure and Function of S-Adenosylmethionine Synthetase: Crystal Structures of S-Adenosylmethionine Synthetase with Adp, Bradp, and Ppi at 28 Angstroms Resolution. Biochemistry V. 35 2586 1996.
ISSN: ISSN 0006-2960
PubMed: 8611562
DOI: 10.1021/BI952604Z
Page generated: Wed Jul 10 16:59:27 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy