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Bromine in PDB 1osy: Crystal Structure of Fip-Fve Fungal Immunomodulatory Protein

Protein crystallography data

The structure of Crystal Structure of Fip-Fve Fungal Immunomodulatory Protein, PDB code: 1osy was solved by P.Palasingam, J.S.Joseph, S.V.Seow, V.Shai, H.Robinson, K.Y.Chua, P.R.Kolatkar, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.02 / 1.70
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 97.118, 97.118, 61.413, 90.00, 90.00, 90.00
R / Rfree (%) 18.2 / 21

Bromine Binding Sites:

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 16;

Binding sites:

The binding sites of Bromine atom in the Crystal Structure of Fip-Fve Fungal Immunomodulatory Protein (pdb code 1osy). This binding sites where shown within 5.0 Angstroms radius around Bromine atom.
In total 16 binding sites of Bromine where determined in the Crystal Structure of Fip-Fve Fungal Immunomodulatory Protein, PDB code: 1osy:
Jump to Bromine binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Bromine binding site 1 out of 16 in 1osy

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Bromine binding site 1 out of 16 in the Crystal Structure of Fip-Fve Fungal Immunomodulatory Protein


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 1 of Crystal Structure of Fip-Fve Fungal Immunomodulatory Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br1001

b:7.7
occ:1.00
 CE A:LYS81 2.4 31.9 1.0
BR A:BR1007 3.1 14.7 1.0
NZ A:LYS81 3.3 35.0 1.0
CD A:LYS81 3.6 28.3 1.0
CB A:LYS81 3.6 18.7 1.0
CA A:LYS81 3.7 17.8 1.0
CG A:LYS81 3.9 22.2 1.0
C A:LYS81 4.3 17.2 1.0
O A:LYS81 4.3 16.9 1.0
O A:HOH1059 4.8 25.8 1.0
N A:LYS81 4.9 16.7 1.0

Bromine binding site 2 out of 16 in 1osy

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Bromine binding site 2 out of 16 in the Crystal Structure of Fip-Fve Fungal Immunomodulatory Protein


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 2 of Crystal Structure of Fip-Fve Fungal Immunomodulatory Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br1002

b:7.9
occ:1.00
 NZ A:LYS89 3.1 29.9 1.0
N A:ALA86 3.7 15.8 1.0
CE A:LYS89 3.8 25.2 1.0
CA A:VAL85 3.8 15.1 1.0
OD1 A:ASN80 3.9 22.8 1.0
CD A:LYS89 4.0 22.3 1.0
CG1 A:VAL85 4.0 15.2 1.0
O A:GLY84 4.0 15.5 1.0
C A:VAL85 4.3 15.5 1.0
CB A:VAL85 4.4 15.3 1.0
CB A:ALA86 4.6 16.3 1.0
CG2 A:VAL85 4.7 15.2 1.0
CG A:ASN80 4.7 17.6 1.0
CA A:ALA86 4.8 16.0 1.0
N A:VAL85 4.8 15.2 1.0
ND2 A:ASN80 4.8 16.4 1.0
C A:GLY84 4.9 15.2 1.0

Bromine binding site 3 out of 16 in 1osy

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Bromine binding site 3 out of 16 in the Crystal Structure of Fip-Fve Fungal Immunomodulatory Protein


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 3 of Crystal Structure of Fip-Fve Fungal Immunomodulatory Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br1003

b:6.6
occ:1.00
 O A:HOH1049 3.3 26.0 1.0
CD A:ARG26 3.5 20.3 1.0
CB A:SER30 3.6 19.0 1.0
CB A:ARG26 3.7 12.9 1.0
CG A:ARG26 4.1 16.0 1.0
OG A:SER30 4.5 20.2 1.0
NE A:ARG26 4.6 24.8 1.0
CA A:SER30 4.7 18.4 1.0
O A:SER30 4.9 17.3 1.0
CA A:ARG26 5.0 12.5 1.0

Bromine binding site 4 out of 16 in 1osy

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Bromine binding site 4 out of 16 in the Crystal Structure of Fip-Fve Fungal Immunomodulatory Protein


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 4 of Crystal Structure of Fip-Fve Fungal Immunomodulatory Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br1005

b:20.0
occ:1.00
 N A:ALA2 3.3 17.1 1.0
O A:HOH1022 3.7 23.9 1.0
CB A:ALA2 3.8 16.4 1.0
CA A:SER1 3.9 17.2 1.0
C A:SER1 4.1 16.9 1.0
CB A:SER1 4.1 17.1 1.0
CD2 B:LEU12 4.1 18.1 1.0
CA A:ALA2 4.2 16.1 1.0
CG B:LEU12 4.7 16.6 1.0
CD1 B:LEU12 4.8 17.3 1.0

Bromine binding site 5 out of 16 in 1osy

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Bromine binding site 5 out of 16 in the Crystal Structure of Fip-Fve Fungal Immunomodulatory Protein


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 5 of Crystal Structure of Fip-Fve Fungal Immunomodulatory Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br1006

b:12.4
occ:1.00
 N A:ILE107 3.1 12.9 1.0
CG2 A:ILE107 3.7 14.4 1.0
CA A:TYR106 3.7 13.7 1.0
CB A:ILE107 3.8 13.6 1.0
C A:TYR106 3.9 13.2 1.0
CA A:ILE107 4.0 13.0 1.0
O A:GLU105 4.3 16.4 1.0
O A:HOH1070 4.5 28.2 1.0
CE2 A:PHE94 4.5 16.1 1.0
CB A:TYR106 4.6 12.9 1.0
O A:HOH1016 4.7 16.8 1.0
CD2 A:PHE94 4.7 13.2 1.0
N A:TYR106 4.7 14.9 1.0
C A:GLU105 4.9 16.3 1.0
CD1 A:TYR106 5.0 15.3 1.0

Bromine binding site 6 out of 16 in 1osy

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Bromine binding site 6 out of 16 in the Crystal Structure of Fip-Fve Fungal Immunomodulatory Protein


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 6 of Crystal Structure of Fip-Fve Fungal Immunomodulatory Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br1007

b:14.7
occ:1.00
 O A:HOH1059 2.9 25.8 1.0
BR A:BR1001 3.1 7.7 1.0
C A:LYS81 3.4 17.2 1.0
N A:GLY82 3.5 16.0 1.0
CA A:LYS81 3.7 17.8 1.0
O A:LYS81 3.8 16.9 1.0
CA A:GLY82 4.0 16.2 1.0
CE A:LYS81 4.3 31.9 1.0
CB A:LYS81 4.6 18.7 1.0
N A:LYS81 4.6 16.7 1.0
NZ A:LYS81 4.8 35.0 1.0
O A:LEU77 4.8 13.1 1.0
O A:HOH1018 5.0 18.0 1.0

Bromine binding site 7 out of 16 in 1osy

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Bromine binding site 7 out of 16 in the Crystal Structure of Fip-Fve Fungal Immunomodulatory Protein


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 7 of Crystal Structure of Fip-Fve Fungal Immunomodulatory Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br1008

b:22.4
occ:1.00
 OG A:SER48 3.2 17.9 1.0
OG A:SER62 3.3 21.8 1.0
CB A:SER62 3.6 20.4 1.0
N A:SER62 3.7 19.1 1.0
C A:GLU61 3.9 18.2 1.0
CA A:GLU61 4.0 17.7 1.0
CB A:SER48 4.1 15.7 1.0
CG1 A:VAL60 4.1 17.8 1.0
CA A:SER62 4.3 20.2 1.0
O A:VAL60 4.3 17.2 1.0
N A:GLU61 4.4 16.8 1.0
C A:VAL60 4.5 17.1 1.0
O A:GLU61 4.5 15.5 1.0
O A:HOH1045 4.6 28.9 1.0
CB A:VAL60 5.0 17.1 1.0

Bromine binding site 8 out of 16 in 1osy

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Bromine binding site 8 out of 16 in the Crystal Structure of Fip-Fve Fungal Immunomodulatory Protein


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 8 of Crystal Structure of Fip-Fve Fungal Immunomodulatory Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br1010

b:2.0
occ:1.00
 O A:HOH1031 2.7 23.3 1.0
N B:GLU110 3.1 9.5 1.0
NZ A:LYS14 3.3 7.5 1.0
CA B:ALA109 3.6 8.9 1.0
CE1 A:TYR11 3.7 10.4 1.0
O B:GLU110 3.7 10.2 1.0
O A:HOH1042 3.8 22.7 1.0
C B:ALA109 3.8 8.7 1.0
CG B:PRO22 3.8 9.3 1.0
CA B:GLU110 4.1 9.5 1.0
OH A:TYR11 4.2 15.1 1.0
CB B:ALA109 4.3 9.0 1.0
CZ A:TYR11 4.3 13.7 1.0
CE A:LYS14 4.3 7.7 1.0
C B:GLU110 4.3 9.7 1.0
CB B:PRO22 4.4 9.8 1.0
CD1 A:TYR11 4.4 9.1 1.0
CB B:GLU110 4.5 10.7 1.0
N B:ALA109 4.6 9.0 1.0
O B:ILE108 4.6 9.9 1.0
CD B:PRO22 4.7 9.3 1.0
C B:ILE108 5.0 9.2 1.0
O B:ALA109 5.0 9.8 1.0

Bromine binding site 9 out of 16 in 1osy

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Bromine binding site 9 out of 16 in the Crystal Structure of Fip-Fve Fungal Immunomodulatory Protein


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 9 of Crystal Structure of Fip-Fve Fungal Immunomodulatory Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br1015

b:2.0
occ:1.00
 NZ B:LYS14 3.1 12.2 1.0
O A:HOH1053 3.4 24.6 1.0
N A:GLU110 3.5 13.6 1.0
O A:GLU110 3.9 13.6 1.0
CG A:PRO22 3.9 12.5 1.0
CA A:ALA109 3.9 12.2 1.0
CE B:LYS14 3.9 10.3 1.0
O A:HOH1056 4.0 24.3 1.0
CE2 B:TYR11 4.0 14.3 1.0
C A:ALA109 4.2 12.1 1.0
CA A:GLU110 4.5 13.3 1.0
O B:HOH1090 4.5 38.9 1.0
CB A:ALA109 4.5 12.1 1.0
C A:GLU110 4.6 13.1 1.0
CB A:PRO22 4.6 12.7 1.0
CD2 B:TYR11 4.7 12.1 1.0
CZ B:TYR11 4.7 15.0 1.0
OH B:TYR11 4.8 16.3 1.0
CD A:PRO22 4.8 12.2 1.0
CB A:GLU110 4.9 14.1 1.0
O A:ILE108 4.9 13.2 1.0
N A:ALA109 5.0 11.3 1.0

Bromine binding site 10 out of 16 in 1osy

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Bromine binding site 10 out of 16 in the Crystal Structure of Fip-Fve Fungal Immunomodulatory Protein


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 10 of Crystal Structure of Fip-Fve Fungal Immunomodulatory Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Br1004

b:10.9
occ:1.00
 N B:ASP17 3.1 11.4 1.0
O B:ASP17 3.6 12.8 1.0
CA B:ILE16 3.7 12.1 1.0
CD2 B:LEU42 3.8 13.7 1.0
CG1 B:ILE16 3.8 13.1 1.0
O B:HOH1057 3.8 24.5 1.0
C B:ILE16 3.8 12.1 1.0
CA B:ASP17 4.0 12.0 1.0
CB B:ASP17 4.1 12.2 1.0
C B:ASP17 4.2 11.8 1.0
CB B:ILE16 4.4 12.6 1.0
O B:LYS15 4.7 13.0 1.0
N B:ILE16 4.7 13.2 1.0
O B:ILE16 5.0 11.3 1.0

Reference:

P.Paaventhan, J.S.Joseph, S.V.Seow, S.Vaday, H.Robinson, K.Y.Chua, P.R.Kolatkar. A 1.7A Structure of Fve, A Member of the New Fungal Immunomodulatory Protein Family J.Mol.Biol. V. 332 461 2003.
ISSN: ISSN 0022-2836
PubMed: 12948495
DOI: 10.1016/S0022-2836(03)00923-9
Page generated: Wed Jul 10 17:08:21 2024

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