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Bromine in PDB 2o2i: Crystal Structure of Haloalkane Dehalogenase RV2579 From Mycobacterium Tuberculosis Complexed with 1,3-Propandiol

Enzymatic activity of Crystal Structure of Haloalkane Dehalogenase RV2579 From Mycobacterium Tuberculosis Complexed with 1,3-Propandiol

All present enzymatic activity of Crystal Structure of Haloalkane Dehalogenase RV2579 From Mycobacterium Tuberculosis Complexed with 1,3-Propandiol:
3.8.1.5;

Protein crystallography data

The structure of Crystal Structure of Haloalkane Dehalogenase RV2579 From Mycobacterium Tuberculosis Complexed with 1,3-Propandiol, PDB code: 2o2i was solved by P.A.Mazumdar, J.Hulecki, M.M.Cherney, C.R.Garen, M.N.G.James, Tbstructural Genomics Consortium (Tbsgc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 36.35 / 1.50
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 60.820, 65.190, 126.090, 90.00, 90.00, 90.00
R / Rfree (%) 14.4 / 17.6

Bromine Binding Sites:

The binding sites of Bromine atom in the Crystal Structure of Haloalkane Dehalogenase RV2579 From Mycobacterium Tuberculosis Complexed with 1,3-Propandiol (pdb code 2o2i). This binding sites where shown within 5.0 Angstroms radius around Bromine atom.
In total only one binding site of Bromine was determined in the Crystal Structure of Haloalkane Dehalogenase RV2579 From Mycobacterium Tuberculosis Complexed with 1,3-Propandiol, PDB code: 2o2i:

Bromine binding site 1 out of 1 in 2o2i

Go back to Bromine Binding Sites List in 2o2i
Bromine binding site 1 out of 1 in the Crystal Structure of Haloalkane Dehalogenase RV2579 From Mycobacterium Tuberculosis Complexed with 1,3-Propandiol


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 1 of Crystal Structure of Haloalkane Dehalogenase RV2579 From Mycobacterium Tuberculosis Complexed with 1,3-Propandiol within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br301

b:7.4
occ:0.80
 O A:HOH529 3.2 37.1 1.0
NE1 A:TRP110 3.4 6.9 1.0
ND2 A:ASN39 3.5 7.5 1.0
N A:PRO209 3.6 6.3 1.0
CA A:PRO209 3.7 6.5 1.0
CD A:PRO209 3.7 7.4 1.0
CZ A:PHE170 3.8 7.5 1.0
CD1 A:TRP110 3.8 9.0 1.0
C A:TRP208 3.9 7.2 1.0
CE1 A:PHE170 3.9 8.1 1.0
CB A:PRO209 4.0 7.4 1.0
CB A:TRP208 4.0 5.6 1.0
CB A:ASN39 4.0 6.4 1.0
CD1 A:LEU212 4.0 8.1 1.0
CE2 A:PHE152 4.1 7.8 1.0
O A:TRP208 4.2 6.8 1.0
CG A:ASN39 4.3 6.3 1.0
CG A:LEU212 4.3 5.8 1.0
CD2 A:LEU212 4.4 7.1 1.0
CG A:PRO209 4.4 7.3 1.0
CA A:TRP208 4.6 6.2 1.0
CE2 A:TRP110 4.7 5.8 1.0
OD2 A:ASP109 4.8 9.6 1.0
CE2 A:PHE170 4.9 8.1 1.0
CZ A:PHE152 4.9 7.9 1.0
CD2 A:PHE152 4.9 6.8 1.0

Reference:

P.A.Mazumdar, J.Hulecki, M.M.Cherney, C.R.Garen, M.N.G.James. Crystal Structure of Haloalkane Dehalogenase RV2579 From Mycobacterium Tuberculosis Complexed with 1,3-Propandiol To Be Published.
Page generated: Wed Jul 10 18:19:01 2024

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