Bromine in the structure of Determination By Mad-Dm Of The Structure of the Dna Duplex D(Acgtacg(5-Bru))2 At 1.46A and 100K (pdb 344d)

The binding sites of Bromine atom in the structure of Determination By Mad-Dm Of The Structure of the Dna Duplex D(Acgtacg(5-Bru))2 At 1.46A and 100K (pdb code 344d). This binding sites where shown with 5.0 Angstroms radius around Bromine atom. The 344d structure was solved by A.R.TODD, A.ADAMS, H.R.POWELL, C.J.CARDIN, with X-Ray Crystallography technique, brief refinement statistics is given in the table below: Resolution (A) 1.5 Space group P43212 a (A) 43.597 b (A) 43.597 c (A) 26.268 alpha (°) 90.00 beta (°) 90.00 gamma (°) 90.00 Rfactor (%) 11.2 Rfree (%) n/a Bromine Binding Sites: Bromine binding site 1 out of 1 in 344d Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Bromine in the PDB 344d. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Bromine atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: Dg7, A: Bru8, A: Hoh10, A: Hoh13, A: Hoh18, A: Hoh23, conact list: Atom Atom Distance (A) Br N9 A:Dg7 3.94 Br N3 A:Dg7 4.66 Br C3' A:Dg7 4.18 Br C8 A:Dg7 3.85 Br C6 A:Dg7 4.56 Br C5 A:Dg7 3.92 Br C1' A:Dg7 4.67 Br N7 A:Dg7 3.86 Br C4 A:Dg7 3.98 Br C2' A:Dg7 4.28 Br N3 A:Bru8 4.25 Br C2 A:Bru8 4.82 Br C6 A:Bru8 2.90 Br N1 A:Bru8 4.23 Br C5 A:Bru8 1.95 Br P A:Bru8 4.77 Br C4 A:Bru8 2.99 Br OP2 A:Bru8 3.88 Br BR A:Bru8 0.00 Br O5' A:Bru8 4.56 Br O4 A:Bru8 3.21 Br O A:Hoh10 4.85 Br O A:Hoh13 3.82 Br O A:Hoh18 4.26 Br O A:Hoh23 3.50 interactive model: