Chemical elements
  Bromine
    Isotopes
    Energy
    Production
    Application
    PDB 101d-1f5m
    PDB 1f6j-1kdh
    PDB 1kfo-1o3l
    PDB 1o5m-1to3
    PDB 1uhj-1zpz
    PDB 1zw9-2fkk
    PDB 2fpr-2j9m
    PDB 2ja5-2qfe
    PDB 2qgd-2wb9
    PDB 2wbb-3biy
    PDB 3bm9-3eki
      3bm9
      3bna
      3bno
      3bnq
      3bnr
      3bns
      3bnt
      3bs1
      3c0v
      3c51
      3c9a
      3ciz
      3cj0
      3cj2
      3cj3
      3cj4
      3cj5
      3cn1
      3cn2
      3cn3
      3cn4
      3cqe
      3cwe
      3cxm
      3d1g
      3d7r
      3dd7
      3dhh
      3dho
      3dj5
      3dj7
      3dlu
      3dn2
      3doy
      3doz
      3dp0
      3dp1
      3dp2
      3dp3
      3dxm
      3dy9
      3dya
      3dye
      3e01
      3e0q
      3e62
      3eds
      3ejy
      3ejz
      3eki
    PDB 3en9-3hvo
    PDB 3hzw-3lbz
    PDB 3ld5-3ot3
    PDB 3oyp-4de3
    PDB 4dey-9est

Bromine in the structure of Crystal Structure of A Putative Esterase From Staphylococcus Aureus (pdb 3d7r)






The binding sites of Bromine atom in the structure of Crystal Structure of A Putative Esterase From Staphylococcus Aureus (pdb code 3d7r). This binding sites where shown with 5.0 Angstroms radius around Bromine atom.
The 3d7r structure was solved by R.LAM, K.P.BATTAILE, T.CHAN, V.ROMANOV, K.LAM, M.SOLOVEYCHIK, J.WU-BROWN, E.F.PAI, N.Y.CHIRGADZE, with X-Ray Crystallography technique, brief refinement statistics is given in the table below:
Resolution (A)41.6-2.0
Space groupP1
a (A)41.888
b (A)46.412
c (A)91.688
alpha (°)80.82
beta (°)89.97
gamma (°)69.51
Rfactor (%)15.8
Rfree (%)19.2


Bromine Binding Sites:

Bromine binding site 1 out of 2 in 3d7r


Bromine binding site 1 out of 2 in 3d7r
Click to enlarge
stereopicture of Bromine binding site 1 out of 2 in 3d7r
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Bromine in the PDB 3d7r. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Bromine atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Tyr272, A: Pro273, A: Lys274, A: Mse275, A: Gln286,

conact list:


AtomAtomDistance (A)
BrO A:Tyr2724.22
BrCB A:Tyr2723.82
BrCD1 A:Tyr2724.11
BrC A:Tyr2723.76
BrCG A:Tyr2724.44
BrCA A:Tyr2723.97
BrN A:Pro2733.77
BrCB A:Pro2734.84
BrCD A:Pro2733.85
BrC A:Pro2734.41
BrCG A:Pro2734.88
BrCA A:Pro2734.53
BrN A:Lys2743.39
BrCB A:Lys2743.95
BrCD A:Lys2744.70
BrC A:Lys2744.44
BrCG A:Lys2744.62
BrCA A:Lys2744.07
BrNZ A:Lys2744.50
BrN A:Mse2754.21
BrCB A:Mse2754.92
BrCE A:Mse2754.31
BrCG A:Mse2754.07
BrCG A:Gln2864.80

interactive model:


Bromine binding site 2 out of 2 in 3d7r


Bromine binding site 2 out of 2 in 3d7r
Click to enlarge
stereopicture of Bromine binding site 2 out of 2 in 3d7r
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 2 of Bromine in the PDB 3d7r. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Bromine atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: B: Tyr272, B: Pro273, B: Lys274, B: Mse275, B: Gln286,

conact list:


AtomAtomDistance (A)
BrO B:Tyr2724.25
BrCB B:Tyr2723.75
BrCD1 B:Tyr2724.12
BrC B:Tyr2723.77
BrCG B:Tyr2724.42
BrCA B:Tyr2723.97
BrN B:Pro2733.77
BrCB B:Pro2734.89
BrCD B:Pro2733.83
BrC B:Pro2734.41
BrCG B:Pro2734.87
BrCA B:Pro2734.56
BrN B:Lys2743.37
BrCB B:Lys2743.83
BrCD B:Lys2744.57
BrC B:Lys2744.40
BrCG B:Lys2744.83
BrCA B:Lys2744.01
BrNZ B:Lys2744.68
BrN B:Mse2754.21
BrCB B:Mse2754.95
BrCE B:Mse2754.29
BrCG B:Mse2754.09
BrCG B:Gln2864.97

interactive model:




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