Atomistry » Bromine » PDB 3gw6-3jtk » 3i32
Atomistry »
  Bromine »
    PDB 3gw6-3jtk »
      3i32 »

Bromine in PDB 3i32: Dimeric Structure of A Hera Helicase Fragment Including the C-Terminal Reca Domain, the Dimerization Domain, and the Rna Binding Domain

Protein crystallography data

The structure of Dimeric Structure of A Hera Helicase Fragment Including the C-Terminal Reca Domain, the Dimerization Domain, and the Rna Binding Domain, PDB code: 3i32 was solved by M.G.Rudolph, D.Klostermeier, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 39.42 / 2.80
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 64.960, 64.960, 153.564, 90.00, 90.00, 90.00
R / Rfree (%) 25.3 / 29.3

Bromine Binding Sites:

The binding sites of Bromine atom in the Dimeric Structure of A Hera Helicase Fragment Including the C-Terminal Reca Domain, the Dimerization Domain, and the Rna Binding Domain (pdb code 3i32). This binding sites where shown within 5.0 Angstroms radius around Bromine atom.
In total 2 binding sites of Bromine where determined in the Dimeric Structure of A Hera Helicase Fragment Including the C-Terminal Reca Domain, the Dimerization Domain, and the Rna Binding Domain, PDB code: 3i32:
Jump to Bromine binding site number: 1; 2;

Bromine binding site 1 out of 2 in 3i32

Go back to Bromine Binding Sites List in 3i32
Bromine binding site 1 out of 2 in the Dimeric Structure of A Hera Helicase Fragment Including the C-Terminal Reca Domain, the Dimerization Domain, and the Rna Binding Domain


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 1 of Dimeric Structure of A Hera Helicase Fragment Including the C-Terminal Reca Domain, the Dimerization Domain, and the Rna Binding Domain within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br511

b:0.2
occ:1.00
NE A:ARG337 3.8 0.0 1.0
CB A:ALA236 4.0 0.5 1.0
O A:ASP308 4.1 87.6 1.0
CB A:LEU309 4.2 70.8 1.0
CB A:PRO238 4.3 0.6 1.0
CB A:ARG337 4.3 96.1 1.0
C A:ASP308 4.5 87.8 1.0
NH1 A:ARG337 4.5 0.5 1.0
CD A:ARG337 4.5 0.1 1.0
CB A:ASP308 4.6 0.3 1.0
CD1 A:LEU309 4.6 61.4 1.0
CZ A:ARG337 4.6 0.2 1.0
CA A:PRO238 4.6 0.1 1.0
O A:ALA236 4.7 0.4 1.0
CG A:LEU309 4.8 64.5 1.0
CA A:LEU309 4.9 76.4 1.0
N A:LEU309 4.9 81.1 1.0
CD2 A:LEU309 4.9 60.5 1.0
CG A:ARG337 5.0 98.8 1.0

Bromine binding site 2 out of 2 in 3i32

Go back to Bromine Binding Sites List in 3i32
Bromine binding site 2 out of 2 in the Dimeric Structure of A Hera Helicase Fragment Including the C-Terminal Reca Domain, the Dimerization Domain, and the Rna Binding Domain


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 2 of Dimeric Structure of A Hera Helicase Fragment Including the C-Terminal Reca Domain, the Dimerization Domain, and the Rna Binding Domain within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br512

b:0.3
occ:1.00
CD2 A:LEU447 3.3 0.9 1.0
CA A:PRO448 4.0 0.9 1.0
N A:PRO448 4.2 0.8 1.0
CG2 A:VAL451 4.3 78.9 1.0
CG A:LEU447 4.4 0.1 1.0
C A:LEU447 4.5 0.2 1.0
CB A:LEU447 4.5 0.8 1.0
CG A:PRO448 4.6 0.4 1.0
CB A:VAL451 4.6 81.8 1.0
CB A:PRO448 4.6 0.9 1.0
CD A:PRO448 4.7 0.8 1.0
O A:LEU447 4.8 0.2 1.0
CG1 A:VAL451 4.9 69.3 1.0

Reference:

M.G.Rudolph, D.Klostermeier. The Thermus Thermophilus Dead Box Helicase Hera Contains A Modified Rna Recognition Motif Domain Loosely Connected to the Helicase Core. Rna V. 15 1993 2009.
ISSN: ISSN 1355-8382
PubMed: 19710183
DOI: 10.1261/RNA.1820009
Page generated: Mon Jul 7 05:25:33 2025

Last articles

Cl in 2IFV
Cl in 2IFD
Cl in 2IFX
Cl in 2IEO
Cl in 2IF7
Cl in 2IES
Cl in 2IEI
Cl in 2IEN
Cl in 2IEG
Cl in 2IEH
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy