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Bromine in PDB 3lql: Human Aldose Reductase Mutant T113A Complexed with Idd 594

Enzymatic activity of Human Aldose Reductase Mutant T113A Complexed with Idd 594

All present enzymatic activity of Human Aldose Reductase Mutant T113A Complexed with Idd 594:
1.1.1.21;

Protein crystallography data

The structure of Human Aldose Reductase Mutant T113A Complexed with Idd 594, PDB code: 3lql was solved by C.Koch, A.Heine, G.Klebe, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 7.97 / 1.13
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 49.290, 66.910, 47.360, 90.00, 92.22, 90.00
R / Rfree (%) 10.1 / 12.7

Other elements in 3lql:

The structure of Human Aldose Reductase Mutant T113A Complexed with Idd 594 also contains other interesting chemical elements:

Fluorine (F) 2 atoms

Bromine Binding Sites:

The binding sites of Bromine atom in the Human Aldose Reductase Mutant T113A Complexed with Idd 594 (pdb code 3lql). This binding sites where shown within 5.0 Angstroms radius around Bromine atom.
In total 2 binding sites of Bromine where determined in the Human Aldose Reductase Mutant T113A Complexed with Idd 594, PDB code: 3lql:
Jump to Bromine binding site number: 1; 2;

Bromine binding site 1 out of 2 in 3lql

Go back to Bromine Binding Sites List in 3lql
Bromine binding site 1 out of 2 in the Human Aldose Reductase Mutant T113A Complexed with Idd 594


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 1 of Human Aldose Reductase Mutant T113A Complexed with Idd 594 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br600

b:6.5
occ:0.73
BR8 A:LDT600 0.0 6.5 0.7
C25 A:LDT600 1.9 5.7 1.0
BR A:BR800 1.9 71.1 0.3
C28 A:LDT600 2.8 5.8 1.0
C29 A:LDT600 2.8 5.5 1.0
CB A:ALA114 3.9 6.4 1.0
CZ A:PHE116 3.9 5.1 1.0
CB A:CYS304 4.0 7.9 1.0
CB A:TRP112 4.0 3.7 1.0
CE3 A:TRP112 4.1 4.2 1.0
C27 A:LDT600 4.1 5.2 1.0
CE1 A:PHE116 4.1 5.0 1.0
SG A:CYS304 4.1 7.9 1.0
C26 A:LDT600 4.1 4.4 1.0
CG A:TRP112 4.1 3.7 1.0
CD2 A:TRP112 4.2 3.8 1.0
CD1 A:TYR310 4.4 7.3 1.0
C24 A:LDT600 4.7 4.9 1.0
SG A:CYS81 4.7 4.0 1.0
CE1 A:TYR310 4.8 6.8 1.0
CZ3 A:TRP112 4.9 5.0 1.0
CD1 A:TRP112 5.0 4.0 1.0

Bromine binding site 2 out of 2 in 3lql

Go back to Bromine Binding Sites List in 3lql
Bromine binding site 2 out of 2 in the Human Aldose Reductase Mutant T113A Complexed with Idd 594


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 2 of Human Aldose Reductase Mutant T113A Complexed with Idd 594 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br800

b:71.1
occ:0.28
BR8 A:LDT600 1.9 6.5 0.7
CB A:ALA114 3.3 6.4 1.0
C25 A:LDT600 3.3 5.7 1.0
CD A:PRO311 3.5 5.7 1.0
CE3 A:TRP112 3.6 4.2 1.0
CB A:TRP112 3.7 3.7 1.0
C28 A:LDT600 3.8 5.8 1.0
N A:ALA114 3.9 4.8 1.0
CD2 A:TRP112 4.1 3.8 1.0
CA A:TYR310 4.2 6.2 1.0
CD A:PRO113 4.2 4.2 1.0
CD1 A:TYR310 4.2 7.3 1.0
CG A:TRP112 4.2 3.7 1.0
CA A:ALA114 4.2 4.8 1.0
C29 A:LDT600 4.4 5.5 1.0
CG A:PRO311 4.4 5.3 1.0
O A:ASP309 4.4 6.1 1.0
CG A:PRO113 4.4 5.1 1.0
N A:PRO113 4.4 3.5 1.0
CZ3 A:TRP112 4.5 5.0 1.0
N A:PRO311 4.7 5.5 1.0
CA A:TRP112 4.7 3.2 1.0
C A:TRP112 4.8 3.1 1.0
N A:TYR310 4.8 6.4 1.0
CE1 A:TYR310 4.8 6.8 1.0
CB A:TYR310 4.9 6.7 1.0
CG A:TYR310 4.9 6.9 1.0
C A:ASP309 4.9 5.8 1.0
C A:PRO113 5.0 5.0 1.0
C A:TYR310 5.0 5.8 1.0

Reference:

C.Koch, A.Heine, G.Klebe. Tracing the Detail: How Mutations Affect Binding Modes and Thermodynamic Signatures of Closely Related Aldose Reductase Inhibitors J.Mol.Biol. V. 406 700 2011.
ISSN: ISSN 0022-2836
PubMed: 21185307
DOI: 10.1016/J.JMB.2010.11.058
Page generated: Wed Jul 10 19:55:32 2024

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