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Bromine in PDB 3src: Structure of Pseudomonas Aeruginosa Pvdq Bound to NS2028

Enzymatic activity of Structure of Pseudomonas Aeruginosa Pvdq Bound to NS2028

All present enzymatic activity of Structure of Pseudomonas Aeruginosa Pvdq Bound to NS2028:
3.5.1.97;

Protein crystallography data

The structure of Structure of Pseudomonas Aeruginosa Pvdq Bound to NS2028, PDB code: 3src was solved by A.M.Gulick, E.J.Drake, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 39.00 / 2.00
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 120.565, 165.828, 93.951, 90.00, 90.00, 90.00
R / Rfree (%) 19.7 / 22.2

Bromine Binding Sites:

The binding sites of Bromine atom in the Structure of Pseudomonas Aeruginosa Pvdq Bound to NS2028 (pdb code 3src). This binding sites where shown within 5.0 Angstroms radius around Bromine atom.
In total only one binding site of Bromine was determined in the Structure of Pseudomonas Aeruginosa Pvdq Bound to NS2028, PDB code: 3src:

Bromine binding site 1 out of 1 in 3src

Go back to Bromine Binding Sites List in 3src
Bromine binding site 1 out of 1 in the Structure of Pseudomonas Aeruginosa Pvdq Bound to NS2028


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 1 of Structure of Pseudomonas Aeruginosa Pvdq Bound to NS2028 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Br1

b:56.9
occ:0.80
BR1 B:28N1 0.0 56.9 0.8
C2 B:28N1 1.9 54.2 0.8
C3 B:28N1 2.8 53.6 0.8
C15 B:28N1 2.8 53.2 0.8
CD1 B:LEU266 3.8 25.9 1.0
CB B:ASN273 3.8 25.4 1.0
CG B:ASN273 3.9 28.6 1.0
CG B:LEU266 4.1 26.7 1.0
C4 B:28N1 4.1 53.0 0.8
C14 B:28N1 4.2 51.7 0.8
OD1 B:ASN273 4.3 30.9 1.0
CZ B:PHE248 4.4 22.7 1.0
ND2 B:ASN273 4.4 30.4 1.0
CZ B:PHE240 4.4 26.6 1.0
CE2 B:PHE248 4.5 24.3 1.0
CE1 B:PHE240 4.6 27.6 1.0
C5 B:28N1 4.6 52.6 0.8
CD2 B:LEU266 4.7 25.8 1.0
CZ2 B:TRP378 4.8 28.1 1.0

Reference:

E.J.Drake, A.M.Gulick. Structural Characterization and High-Throughput Screening of Inhibitors of Pvdq, An Ntn Hydrolase Involved in Pyoverdine Synthesis. Acs Chem.Biol. V. 6 1277 2011.
ISSN: ISSN 1554-8929
PubMed: 21892836
DOI: 10.1021/CB2002973
Page generated: Wed Jul 10 20:21:02 2024

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