Bromine in PDB 3v08: Crystal Structure of Equine Serum Albumin

The structure of Crystal Structure of Equine Serum Albumin, PDB code: 3v08 was solved by A.Dayal, K.Jablonska, P.J.Porebski, K.A.Majorek, M.Chruszcz, S.C.Almo, W.Minor, New York Structural Genomics Research Consortium (Nysgrc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	50.00 / 2.45
Space group	P 61
Cell size a, b, c (Å), α, β, γ (°)	94.621, 94.621, 142.564, 90.00, 90.00, 120.00
R / Rfree (%)	20.3 / 24.5

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 11;

Binding sites:

The binding sites of Bromine atom in the Crystal Structure of Equine Serum Albumin (pdb code 3v08). This binding sites where shown within 5.0 Angstroms radius around Bromine atom.
In total 11 binding sites of Bromine where determined in the Crystal Structure of Equine Serum Albumin, PDB code: 3v08:
Jump to Bromine binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Bromine binding site 1 out of 11 in the Crystal Structure of Equine Serum Albumin


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 1 of Crystal Structure of Equine Serum Albumin within 5.0Å range: probe atom residue distance (Å) B Occ A:Br584 b:66.3 occ:1.00 O A:HOH652 3.1 34.5 1.0 OG A:SER192 3.2 35.8 1.0 N A:TYR147 3.3 32.1 1.0 O A:HOH638 3.3 33.2 1.0 C A:HIS145 3.4 34.1 1.0 CA A:HIS145 3.5 34.7 1.0 CB A:HIS145 3.6 34.5 1.0 N A:PRO146 3.6 33.5 1.0 N A:PHE148 3.8 30.0 1.0 CD A:PRO146 3.8 34.2 1.0 O A:HIS145 3.9 32.5 1.0 CA A:TYR147 3.9 30.4 1.0 CB A:TYR147 3.9 29.4 1.0 C A:TYR147 4.0 29.8 1.0 O A:HOH645 4.0 28.9 1.0 CD A:ARG196 4.2 27.5 1.0 O A:SER192 4.3 30.2 1.0 C A:PRO146 4.3 32.6 1.0 O A:HOH741 4.4 33.0 1.0 CD1 A:TYR147 4.5 32.4 1.0 ND1 A:HIS145 4.5 36.0 1.0 CA A:PRO146 4.5 33.7 1.0 CG A:HIS145 4.5 35.7 1.0 CB A:SER192 4.5 33.6 1.0 CG A:PRO146 4.6 34.1 1.0 CA A:PHE148 4.6 29.8 1.0 CB A:ARG196 4.6 27.1 1.0 O A:TYR147 4.7 31.3 1.0 CG A:TYR147 4.7 31.4 1.0 C A:SER192 4.9 30.1 1.0 CG A:ARG196 4.9 27.2 1.0 OD1 A:ASP108 5.0 34.0 1.0 N A:HIS145 5.0 38.4 1.0

Bromine binding site 2 out of 11 in the Crystal Structure of Equine Serum Albumin


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 2 of Crystal Structure of Equine Serum Albumin within 5.0Å range: probe atom residue distance (Å) B Occ A:Br585 b:70.0 occ:1.00 OG A:SER286 3.0 37.5 1.0 CD A:ARG256 3.4 38.2 1.0 CB A:SER286 3.5 36.9 1.0 CD1 A:LEU282 3.5 44.3 1.0 NH1 A:ARG256 3.5 40.1 1.0 CG A:LEU282 3.9 44.7 1.0 NE A:ARG256 4.2 39.1 1.0 CG A:ARG256 4.2 36.3 1.0 CZ A:ARG256 4.2 39.8 1.0 CB A:PRO151 4.2 40.0 1.0 CB A:ARG256 4.3 34.4 1.0 CD2 A:LEU283 4.3 41.4 1.0 N A:ALA257 4.4 30.0 1.0 CD2 A:LEU282 4.4 41.7 1.0 O A:LEU282 4.4 46.5 1.0 C A:ARG256 4.6 30.7 1.0 CA A:ALA257 4.6 31.0 1.0 O A:ALA253 4.7 31.2 1.0 CA A:LEU283 4.8 43.1 1.0 C A:LEU282 4.8 44.9 1.0 O A:ARG256 4.8 31.3 1.0 CB A:ALA257 4.9 28.9 1.0 CA A:SER286 4.9 37.7 1.0 CG A:PRO151 5.0 39.4 1.0

Bromine binding site 3 out of 11 in the Crystal Structure of Equine Serum Albumin


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 3 of Crystal Structure of Equine Serum Albumin within 5.0Å range: probe atom residue distance (Å) B Occ A:Br586 b:66.1 occ:1.00 OG1 A:THR421 3.3 31.2 1.0 OG A:SER418 3.4 35.1 1.0 CG1 A:VAL417 3.5 32.2 1.0 N A:SER418 3.6 34.5 1.0 CB A:THR421 3.8 30.4 1.0 CB A:SER418 3.8 36.2 1.0 CA A:HIS463 4.1 39.8 1.0 CG2 A:THR421 4.2 27.6 1.0 N A:HIS463 4.2 38.6 1.0 CA A:SER418 4.3 35.4 1.0 C A:LEU462 4.4 38.5 1.0 CA A:VAL417 4.5 35.3 1.0 CB A:HIS463 4.5 38.2 1.0 CB A:VAL417 4.5 33.5 1.0 O A:LEU462 4.5 41.9 1.0 C A:VAL417 4.5 35.1 1.0 CB A:LEU462 4.7 37.0 1.0 OG1 A:THR466 4.9 71.0 1.0 CD2 A:HIS463 4.9 40.9 1.0

Bromine binding site 4 out of 11 in the Crystal Structure of Equine Serum Albumin


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 4 of Crystal Structure of Equine Serum Albumin within 5.0Å range: probe atom residue distance (Å) B Occ A:Br587 b:87.0 occ:1.00 CB A:SER269 3.7 58.9 1.0 CA A:HIS266 3.8 47.8 1.0 CB A:HIS266 3.9 47.6 1.0 CD2 A:HIS266 4.0 51.4 1.0 CG A:HIS266 4.1 49.2 1.0 N A:SER269 4.3 58.5 1.0 O A:HIS266 4.3 44.8 1.0 C A:HIS266 4.4 47.2 1.0 O A:GLU265 4.4 49.8 1.0 OG A:SER269 4.6 60.1 1.0 CA A:SER269 4.7 57.8 1.0 CB A:ASP268 4.8 65.8 1.0

Bromine binding site 5 out of 11 in the Crystal Structure of Equine Serum Albumin


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 5 of Crystal Structure of Equine Serum Albumin within 5.0Å range: probe atom residue distance (Å) B Occ A:Br588 b:60.8 occ:1.00 OG A:SER469 3.2 37.3 1.0 CG A:GLN416 3.3 50.2 1.0 CB A:SER469 3.4 38.1 1.0 CA A:ALA414 3.5 34.2 1.0 CB A:GLN416 3.6 46.9 1.0 N A:GLN416 3.6 40.6 1.0 CD A:PRO415 3.7 37.6 1.0 C A:ALA414 3.7 34.2 1.0 N A:PRO415 3.8 35.3 1.0 CB A:ALA414 4.1 32.9 1.0 CA A:GLN416 4.2 43.1 1.0 O A:LYS413 4.4 40.5 1.0 O A:ALA414 4.4 34.0 1.0 CG A:PRO415 4.5 38.8 1.0 CE A:LYS471 4.5 43.0 1.0 CA A:SER469 4.5 40.1 1.0 C A:PRO415 4.6 38.2 1.0 N A:ALA414 4.7 35.4 1.0 CA A:PRO415 4.7 36.5 1.0 CD A:GLN416 4.8 56.3 1.0 NZ A:LYS471 4.8 42.7 1.0 O A:HOH617 4.9 41.6 1.0 N A:VAL417 5.0 37.6 1.0 C A:LYS413 5.0 36.5 1.0

Bromine binding site 6 out of 11 in the Crystal Structure of Equine Serum Albumin


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 6 of Crystal Structure of Equine Serum Albumin within 5.0Å range: probe atom residue distance (Å) B Occ A:Br589 b:95.5 occ:1.00 CA A:GLU564 3.6 49.0 1.0 N A:ALA510 3.6 43.2 1.0 CB A:GLU564 3.7 52.7 1.0 O A:GLU564 3.7 45.0 1.0 ND1 A:HIS509 3.9 43.3 1.0 CB A:PHE567 3.9 42.0 1.0 CB A:HIS509 3.9 42.9 1.0 CA A:HIS509 4.0 43.8 1.0 C A:GLU564 4.1 47.4 1.0 CB A:ALA510 4.2 42.9 1.0 C A:HIS509 4.3 43.9 1.0 CG A:HIS509 4.3 42.7 1.0 CG A:GLU564 4.4 55.7 1.0 CA A:ALA510 4.5 43.4 1.0 CG A:PHE567 4.6 41.0 1.0 N A:GLU564 4.8 48.3 1.0 CD1 A:PHE567 4.8 40.9 1.0 N A:ALA568 4.9 45.2 1.0 CE1 A:HIS509 5.0 43.8 1.0

Bromine binding site 7 out of 11 in the Crystal Structure of Equine Serum Albumin


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 7 of Crystal Structure of Equine Serum Albumin within 5.0Å range: probe atom residue distance (Å) B Occ A:Br595 b:80.1 occ:1.00 C A:ASP248 3.3 36.2 1.0 CD1 A:LEU66 3.3 58.5 1.0 CA A:ASP248 3.3 38.6 1.0 N A:LEU250 3.5 33.8 1.0 N A:GLU251 3.6 34.2 1.0 CB A:LEU250 3.6 36.0 1.0 CB A:ASP248 3.6 39.5 1.0 N A:LEU249 3.7 36.0 1.0 O A:ASP248 3.7 33.9 1.0 CB A:LEU66 3.8 55.8 1.0 CG A:LEU66 3.9 57.7 1.0 CA A:LEU250 4.0 34.4 1.0 CD2 A:LEU66 4.0 50.4 1.0 CG A:LEU250 4.1 37.3 1.0 CB A:GLU251 4.2 37.5 1.0 C A:LEU250 4.3 33.6 1.0 OD1 A:ASP248 4.3 45.2 1.0 CD1 A:LEU250 4.3 39.7 1.0 C A:LEU249 4.5 33.5 1.0 CG A:ASP248 4.5 43.5 1.0 CA A:GLU251 4.5 34.6 1.0 CA A:LEU249 4.7 34.4 1.0 N A:ASP248 4.7 39.1 1.0 O A:GLY247 5.0 38.5 1.0

Bromine binding site 8 out of 11 in the Crystal Structure of Equine Serum Albumin


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 8 of Crystal Structure of Equine Serum Albumin within 5.0Å range: probe atom residue distance (Å) B Occ A:Br597 b:71.5 occ:1.00 CG2 A:VAL46 3.8 49.3 1.0 CA A:VAL46 3.9 51.0 1.0 CD1 A:PHE49 4.0 51.1 1.0 CB A:PHE49 4.2 54.9 1.0 CG A:PHE49 4.3 53.9 1.0 CB A:VAL46 4.3 49.8 1.0 CD A:LYS73 4.4 50.8 1.0 CG1 A:VAL46 4.6 48.1 1.0 O A:LEU69 4.6 44.2 1.0 CB A:LEU69 4.6 44.1 1.0 N A:VAL46 4.7 51.6 1.0 CE A:LYS73 4.7 53.7 1.0 CE1 A:PHE49 4.7 52.2 1.0 CD2 A:LEU69 4.8 45.3 1.0 O A:VAL46 4.8 52.1 1.0 C A:VAL46 4.9 51.0 1.0 CG A:LYS73 4.9 48.0 1.0 CB A:LYS73 5.0 44.7 1.0

Bromine binding site 9 out of 11 in the Crystal Structure of Equine Serum Albumin


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 9 of Crystal Structure of Equine Serum Albumin within 5.0Å range: probe atom residue distance (Å) B Occ A:Br611 b:57.1 occ:1.00 O A:HOH721 3.1 36.6 1.0 O A:HOH720 3.1 31.8 1.0 O A:HOH738 3.2 28.2 1.0 O A:HOH649 3.2 23.7 1.0 CA A:ALA455 3.5 24.2 1.0 O A:LEU454 3.6 26.4 1.0 N A:ALA455 3.7 24.0 1.0 C A:LEU454 3.8 24.5 1.0 CG2 A:THR428 3.8 31.9 1.0 CB A:ALA193 3.8 28.9 1.0 CB A:ALA455 4.0 22.4 1.0 CB A:ARG458 4.2 26.9 1.0 CB A:LEU454 4.3 25.0 1.0 O A:HOH740 4.5 45.0 1.0 OG1 A:THR428 4.7 33.2 1.0 CG A:ARG458 4.7 27.8 1.0 CA A:LEU454 4.7 25.2 1.0 C A:ALA455 4.7 24.2 1.0 O A:HOH653 4.7 32.5 1.0 CB A:THR428 4.7 32.4 1.0 O A:ALA455 5.0 25.2 1.0 O A:HOH648 5.0 33.2 1.0

Bromine binding site 10 out of 11 in the Crystal Structure of Equine Serum Albumin


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 10 of Crystal Structure of Equine Serum Albumin within 5.0Å range: probe atom residue distance (Å) B Occ A:Br612 b:91.5 occ:1.00 O A:HOH726 3.3 39.5 1.0 O A:HOH693 3.5 25.0 1.0 OG A:SER488 3.7 37.2 1.0 CD2 A:LEU386 3.9 65.2 1.0 NH2 A:ARG409 4.2 38.6 1.0 CA A:SER488 4.3 35.0 1.0 CD A:ARG409 4.3 35.6 1.0 CB A:SER488 4.4 35.7 1.0 CG A:LEU386 4.5 66.0 1.0 NZ A:LYS413 4.5 34.9 1.0 CE A:LYS413 4.5 34.3 1.0 OH A:TYR410 4.6 30.1 1.0 CZ A:ARG409 4.9 39.6 1.0 NE A:ARG409 4.9 37.9 1.0

K.A.Majorek, P.J.Porebski, A.Dayal, M.D.Zimmerman, K.Jablonska, A.J.Stewart, M.Chruszcz, W.Minor. Structural and Immunologic Characterization of Bovine, Horse, and Rabbit Serum Albumins. Mol.Immunol. V. 52 174 2012.
ISSN: ISSN 0161-5890
PubMed: 22677715
DOI: 10.1016/J.MOLIMM.2012.05.011