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Bromine in PDB 4d1c: Structure of MHP1, A Nucleobase-Cation-Symport-1 Family Transporter, in A Closed Conformation with Bromovinylhydantoin Bound.

Protein crystallography data

The structure of Structure of MHP1, A Nucleobase-Cation-Symport-1 Family Transporter, in A Closed Conformation with Bromovinylhydantoin Bound., PDB code: 4d1c was solved by S.Weyand, F.Brueckner, T.Geng, D.Drew, S.Iwata, P.J.F.Henderson, A.D.Cameron, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 28.896 / 3.70
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 90.012, 107.323, 109.255, 90.00, 90.00, 90.00
R / Rfree (%) 25.71 / 28.75

Other elements in 4d1c:

The structure of Structure of MHP1, A Nucleobase-Cation-Symport-1 Family Transporter, in A Closed Conformation with Bromovinylhydantoin Bound. also contains other interesting chemical elements:

Sodium (Na) 1 atom

Bromine Binding Sites:

The binding sites of Bromine atom in the Structure of MHP1, A Nucleobase-Cation-Symport-1 Family Transporter, in A Closed Conformation with Bromovinylhydantoin Bound. (pdb code 4d1c). This binding sites where shown within 5.0 Angstroms radius around Bromine atom.
In total only one binding site of Bromine was determined in the Structure of MHP1, A Nucleobase-Cation-Symport-1 Family Transporter, in A Closed Conformation with Bromovinylhydantoin Bound., PDB code: 4d1c:

Bromine binding site 1 out of 1 in 4d1c

Go back to Bromine Binding Sites List in 4d1c
Bromine binding site 1 out of 1 in the Structure of MHP1, A Nucleobase-Cation-Symport-1 Family Transporter, in A Closed Conformation with Bromovinylhydantoin Bound.


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 1 of Structure of MHP1, A Nucleobase-Cation-Symport-1 Family Transporter, in A Closed Conformation with Bromovinylhydantoin Bound. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br1467

b:0.9
occ:1.00
BR1 A:B5H1467 0.0 0.9 1.0
CE2 A:B5H1467 1.9 0.5 1.0
CZ A:B5H1467 2.9 0.5 1.0
CD2 A:B5H1467 2.9 0.6 1.0
O A:ALA44 3.4 0.8 1.0
CB A:ALA48 3.5 0.5 1.0
CA A:ILE45 3.6 0.2 1.0
C A:ALA44 3.7 0.9 1.0
CD1 A:LEU363 3.7 0.1 1.0
N A:ILE45 3.9 0.7 1.0
CE1 A:B5H1467 4.2 0.8 1.0
CG A:B5H1467 4.2 0.7 1.0
CB A:ILE45 4.3 1.0 1.0
CG1 A:ILE45 4.4 0.3 1.0
CB A:ALA44 4.4 0.5 1.0
CD1 A:B5H1467 4.7 0.1 1.0
CA A:ALA44 4.7 0.3 1.0
NE2 A:GLN42 4.7 0.4 1.0
CA A:ALA48 4.8 0.5 1.0
C A:ILE45 4.8 0.8 1.0
N A:ALA48 4.9 0.4 1.0
CG A:LEU363 5.0 0.0 1.0

Reference:

K.J.Simmons, S.M.Jackson, F.Brueckner, S.G.Patching, O.Beckstein, E.Ivanova, T.Geng, S.Weyand, D.Drew, J.Lanigan, D.J.Sharples, M.S.Sansom, S.Iwata, C.W.Fishwick, A.P.Johnson, A.D.Cameron, P.J.Henderson. Molecular Mechanism of Ligand Recognition By Membrane Transport Protein, MHP1. Embo J. V. 33 1831 2014.
ISSN: ISSN 0261-4189
PubMed: 24952894
DOI: 10.15252/EMBJ.201387557
Page generated: Wed Jul 10 20:59:33 2024

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