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Bromine in PDB 4i0e: Design and Synthesis of Thiophene Dihydroisoquinolins As Novel Bace-1 Inhibitors

Enzymatic activity of Design and Synthesis of Thiophene Dihydroisoquinolins As Novel Bace-1 Inhibitors

All present enzymatic activity of Design and Synthesis of Thiophene Dihydroisoquinolins As Novel Bace-1 Inhibitors:
3.4.23.46;

Protein crystallography data

The structure of Design and Synthesis of Thiophene Dihydroisoquinolins As Novel Bace-1 Inhibitors, PDB code: 4i0e was solved by N.Yao, E.Brecht, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 60.00 / 1.70
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 75.062, 103.335, 100.306, 90.00, 90.00, 90.00
R / Rfree (%) 23 / 30

Other elements in 4i0e:

The structure of Design and Synthesis of Thiophene Dihydroisoquinolins As Novel Bace-1 Inhibitors also contains other interesting chemical elements:

Chlorine (Cl) 1 atom
Zinc (Zn) 3 atoms

Bromine Binding Sites:

The binding sites of Bromine atom in the Design and Synthesis of Thiophene Dihydroisoquinolins As Novel Bace-1 Inhibitors (pdb code 4i0e). This binding sites where shown within 5.0 Angstroms radius around Bromine atom.
In total only one binding site of Bromine was determined in the Design and Synthesis of Thiophene Dihydroisoquinolins As Novel Bace-1 Inhibitors, PDB code: 4i0e:

Bromine binding site 1 out of 1 in 4i0e

Go back to Bromine Binding Sites List in 4i0e
Bromine binding site 1 out of 1 in the Design and Synthesis of Thiophene Dihydroisoquinolins As Novel Bace-1 Inhibitors


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 1 of Design and Synthesis of Thiophene Dihydroisoquinolins As Novel Bace-1 Inhibitors within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br504

b:41.5
occ:1.00
BR1 A:1B8504 0.0 41.5 1.0
C16 A:1B8504 2.0 36.1 1.0
C15 A:1B8504 3.1 36.0 1.0
S17 A:1B8504 3.1 37.9 1.0
O A:GLY291 3.3 28.0 1.0
O A:HOH651 3.4 31.1 1.0
C14 A:1B8504 3.4 33.6 1.0
C A:GLY291 3.5 27.4 1.0
OG1 A:THR293 3.7 26.5 1.0
CA A:GLY74 3.8 36.3 1.0
N A:GLY74 3.8 37.9 1.0
C13 A:1B8504 3.9 29.0 1.0
N A:THR293 4.0 22.8 1.0
N A:THR292 4.0 26.7 1.0
C A:THR292 4.0 26.0 1.0
CA A:THR292 4.2 25.6 1.0
CA A:GLY291 4.3 27.3 1.0
C19 A:1B8504 4.3 36.9 1.0
O A:SER290 4.3 28.0 1.0
C A:GLN73 4.4 38.9 1.0
O A:THR292 4.4 22.2 1.0
C18 A:1B8504 4.4 39.2 1.0
CA A:THR293 4.5 25.4 1.0
N9 A:1B8504 4.6 29.8 1.0
CB A:THR293 4.7 26.3 1.0
O26 A:1B8504 4.7 27.5 1.0
C25 A:1B8504 4.8 28.5 1.0
CA A:GLN73 4.8 40.9 1.0
O A:GLY72 4.9 43.7 1.0
O A:GLN73 4.9 38.6 1.0
N12 A:1B8504 5.0 30.6 1.0
CD1 A:LEU91 5.0 35.6 1.0
N A:GLN73 5.0 41.1 1.0
C A:GLY72 5.0 43.8 1.0

Reference:

Y.Z.Xu, S.Yuan, S.Bowers, R.K.Hom, W.Chan, H.L.Sham, Y.L.Zhu, P.Beroza, H.Pan, E.Brecht, N.Yao, J.Lougheed, J.Yan, D.Tam, Z.Ren, L.Ruslim, M.P.Bova, D.R.Artis. Design and Synthesis of Thiophene Dihydroisoquinolines As Novel BACE1 Inhibitors. Bioorg.Med.Chem.Lett. V. 23 3075 2013.
ISSN: ISSN 0960-894X
PubMed: 23570791
DOI: 10.1016/J.BMCL.2013.03.009
Page generated: Sat Dec 12 02:20:11 2020

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