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Bromine in PDB 4l8z: Crystal Structure of Human HSP90 with RL1

Protein crystallography data

The structure of Crystal Structure of Human HSP90 with RL1, PDB code: 4l8z was solved by J.Li, J.Ren, M.Yang, B.Xiong, J.He, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.84 / 1.70
Space group I 2 2 2
Cell size a, b, c (Å), α, β, γ (°) 69.853, 88.565, 97.964, 90.00, 90.00, 90.00
R / Rfree (%) 19.4 / 21.8

Bromine Binding Sites:

The binding sites of Bromine atom in the Crystal Structure of Human HSP90 with RL1 (pdb code 4l8z). This binding sites where shown within 5.0 Angstroms radius around Bromine atom.
In total only one binding site of Bromine was determined in the Crystal Structure of Human HSP90 with RL1, PDB code: 4l8z:

Bromine binding site 1 out of 1 in 4l8z

Go back to Bromine Binding Sites List in 4l8z
Bromine binding site 1 out of 1 in the Crystal Structure of Human HSP90 with RL1


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 1 of Crystal Structure of Human HSP90 with RL1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br301

b:24.9
occ:1.00
BR1 A:RL1301 0.0 24.9 1.0
C17 A:RL1301 1.9 19.1 1.0
C16 A:RL1301 2.8 18.9 1.0
C18 A:RL1301 2.9 22.6 1.0
CD2 A:TRP162 3.5 14.9 1.0
CG A:TRP162 3.5 15.8 1.0
CD2 A:LEU103 3.6 17.0 1.0
CE2 A:TRP162 3.7 15.0 1.0
CD1 A:TRP162 3.7 17.1 1.0
CG2 A:VAL150 3.8 18.0 1.0
NE1 A:TRP162 3.8 17.9 1.0
CB A:VAL150 3.9 15.9 1.0
CG1 A:VAL150 4.0 20.0 1.0
CE3 A:TRP162 4.0 16.5 1.0
CB A:TRP162 4.1 15.6 1.0
CE A:MET98 4.1 20.6 1.0
N12 A:RL1301 4.1 17.4 1.0
C19 A:RL1301 4.2 21.6 1.0
CZ2 A:TRP162 4.4 18.2 1.0
SD A:MET98 4.6 19.4 1.0
C13 A:RL1301 4.6 20.0 1.0
CZ A:PHE138 4.6 17.6 1.0
CZ3 A:TRP162 4.7 17.5 1.0
CH2 A:TRP162 4.8 18.2 1.0
CE1 A:PHE138 5.0 17.2 1.0

Reference:

J.Ren, J.Li, Y.Wang, W.Chen, A.Shen, H.Liu, D.Chen, D.Cao, Y.Li, N.Zhang, Y.Xu, M.Geng, J.He, B.Xiong, J.Shen. Identification of A New Series of Potent Diphenol HSP90 Inhibitors By Fragment Merging and Structure-Based Optimization Bioorg.Med.Chem.Lett. V. 24 2525 2014.
ISSN: ISSN 0960-894X
PubMed: 24751441
DOI: 10.1016/J.BMCL.2014.03.100
Page generated: Wed Jul 10 21:55:10 2024

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