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Bromine in PDB 4mo1: Crystal Structure of Antitermination Protein Q From Bacteriophage Lambda. Northeast Structural Genomics Consortium Target OR18A.

Protein crystallography data

The structure of Crystal Structure of Antitermination Protein Q From Bacteriophage Lambda. Northeast Structural Genomics Consortium Target OR18A., PDB code: 4mo1 was solved by S.Vorobiev, M.Su, B.Nickels, J.Seetharaman, S.Sahdev, R.Xiao, S.Kogan, M.Maglaqui, D.Wang, J.K.Everett, T.B.Acton, R.H.Ebright, G.T.Montelione, J.Hunt, L.Tong, Northeast Structural Genomics Consortium (Nesg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 43.35 / 2.10
Space group P 32
Cell size a, b, c (Å), α, β, γ (°) 54.474, 54.474, 109.852, 90.00, 90.00, 120.00
R / Rfree (%) 21.4 / 24.9

Other elements in 4mo1:

The structure of Crystal Structure of Antitermination Protein Q From Bacteriophage Lambda. Northeast Structural Genomics Consortium Target OR18A. also contains other interesting chemical elements:

Chlorine (Cl) 3 atoms
Zinc (Zn) 2 atoms

Bromine Binding Sites:

The binding sites of Bromine atom in the Crystal Structure of Antitermination Protein Q From Bacteriophage Lambda. Northeast Structural Genomics Consortium Target OR18A. (pdb code 4mo1). This binding sites where shown within 5.0 Angstroms radius around Bromine atom.
In total 3 binding sites of Bromine where determined in the Crystal Structure of Antitermination Protein Q From Bacteriophage Lambda. Northeast Structural Genomics Consortium Target OR18A., PDB code: 4mo1:
Jump to Bromine binding site number: 1; 2; 3;

Bromine binding site 1 out of 3 in 4mo1

Go back to Bromine Binding Sites List in 4mo1
Bromine binding site 1 out of 3 in the Crystal Structure of Antitermination Protein Q From Bacteriophage Lambda. Northeast Structural Genomics Consortium Target OR18A.


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 1 of Crystal Structure of Antitermination Protein Q From Bacteriophage Lambda. Northeast Structural Genomics Consortium Target OR18A. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br302

b:40.2
occ:0.32
O A:ALA66 3.1 45.7 1.0
O A:HOH449 3.7 50.0 1.0
CA A:ALA66 3.8 41.9 1.0
CB A:ALA66 3.8 49.7 1.0
C A:ALA66 3.8 43.3 1.0
CB A:TYR69 4.2 35.7 1.0
CD2 A:TYR69 4.3 31.4 1.0
N A:LEU70 4.5 28.1 1.0
CB A:LEU70 4.7 23.6 1.0
CG A:TYR69 4.7 35.1 1.0
CE1 A:TYR104 4.9 37.8 1.0
CA A:LEU70 5.0 28.2 1.0

Bromine binding site 2 out of 3 in 4mo1

Go back to Bromine Binding Sites List in 4mo1
Bromine binding site 2 out of 3 in the Crystal Structure of Antitermination Protein Q From Bacteriophage Lambda. Northeast Structural Genomics Consortium Target OR18A.


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 2 of Crystal Structure of Antitermination Protein Q From Bacteriophage Lambda. Northeast Structural Genomics Consortium Target OR18A. within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Br302

b:51.1
occ:0.24
O B:HOH456 2.8 42.1 1.0
OE1 B:GLU194 3.9 64.1 1.0
CA B:CYS191 4.1 16.6 1.0
CB B:GLU194 4.1 44.4 1.0
SG B:CYS191 4.1 26.9 1.0
CB B:CYS191 4.2 22.6 1.0
CG B:GLU194 4.2 61.1 1.0
CE1 B:TYR104 4.3 30.1 1.0
O B:HOH427 4.5 46.0 1.0
CD B:GLU194 4.5 59.4 1.0
O B:CYS191 4.6 30.9 1.0
CD1 B:TYR104 4.8 29.4 1.0
C B:CYS191 4.9 26.6 1.0

Bromine binding site 3 out of 3 in 4mo1

Go back to Bromine Binding Sites List in 4mo1
Bromine binding site 3 out of 3 in the Crystal Structure of Antitermination Protein Q From Bacteriophage Lambda. Northeast Structural Genomics Consortium Target OR18A.


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 3 of Crystal Structure of Antitermination Protein Q From Bacteriophage Lambda. Northeast Structural Genomics Consortium Target OR18A. within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Br303

b:35.8
occ:0.22
O B:ASP106 2.9 19.7 1.0
O B:HOH429 3.0 35.2 1.0
OD1 B:ASP106 3.0 56.9 1.0
OG B:SER110 3.4 36.0 1.0
CB B:ARG109 3.7 25.2 1.0
C B:ASP106 3.7 20.4 1.0
CG B:ASP106 3.7 46.7 1.0
CA B:ASP106 3.8 18.7 1.0
CE B:MSE155 3.9 67.7 1.0
N B:SER110 3.9 17.1 1.0
O B:HOH424 4.0 43.0 1.0
CG B:ARG109 4.1 46.2 1.0
CB B:ASP106 4.4 33.9 1.0
O B:HOH405 4.4 22.2 1.0
CB B:SER110 4.4 23.1 1.0
OD2 B:ASP106 4.4 52.8 1.0
CD B:ARG109 4.4 60.7 1.0
CA B:SER110 4.5 20.9 1.0
C B:ARG109 4.5 20.0 1.0
CA B:ARG109 4.7 27.9 1.0
O B:HOH428 4.7 45.8 1.0
N B:TYR107 5.0 25.3 1.0

Reference:

S.Vorobiev, M.Su, B.Nickels, J.Seetharaman, S.Sahdev, R.Xiao, S.Kogan, M.Maglaqui, D.Wang, J.K.Everett, T.B.Acton, R.H.Ebright, G.T.Montelione, J.Hunt, L.Tong. Crystal Structure of Antitermination Protein Q From Bacteriophage Lambda. To Be Published.
Page generated: Sat Dec 12 02:21:33 2020

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