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Bromine in PDB 4olf: Crystal Structure of Prolyl-Trna Synthetase (Prors, Proline--Trna Ligase)From Plasmodium Falciparum in Complex with Halofuginone and Amppnp

Enzymatic activity of Crystal Structure of Prolyl-Trna Synthetase (Prors, Proline--Trna Ligase)From Plasmodium Falciparum in Complex with Halofuginone and Amppnp

All present enzymatic activity of Crystal Structure of Prolyl-Trna Synthetase (Prors, Proline--Trna Ligase)From Plasmodium Falciparum in Complex with Halofuginone and Amppnp:
6.1.1.15;

Protein crystallography data

The structure of Crystal Structure of Prolyl-Trna Synthetase (Prors, Proline--Trna Ligase)From Plasmodium Falciparum in Complex with Halofuginone and Amppnp, PDB code: 4olf was solved by Seattle Structural Genomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 46.24 / 2.90
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 106.550, 106.550, 186.160, 90.00, 90.00, 120.00
R / Rfree (%) 19.8 / 23.6

Other elements in 4olf:

The structure of Crystal Structure of Prolyl-Trna Synthetase (Prors, Proline--Trna Ligase)From Plasmodium Falciparum in Complex with Halofuginone and Amppnp also contains other interesting chemical elements:

Chlorine (Cl) 1 atom
Sodium (Na) 1 atom

Bromine Binding Sites:

The binding sites of Bromine atom in the Crystal Structure of Prolyl-Trna Synthetase (Prors, Proline--Trna Ligase)From Plasmodium Falciparum in Complex with Halofuginone and Amppnp (pdb code 4olf). This binding sites where shown within 5.0 Angstroms radius around Bromine atom.
In total only one binding site of Bromine was determined in the Crystal Structure of Prolyl-Trna Synthetase (Prors, Proline--Trna Ligase)From Plasmodium Falciparum in Complex with Halofuginone and Amppnp, PDB code: 4olf:

Bromine binding site 1 out of 1 in 4olf

Go back to Bromine Binding Sites List in 4olf
Bromine binding site 1 out of 1 in the Crystal Structure of Prolyl-Trna Synthetase (Prors, Proline--Trna Ligase)From Plasmodium Falciparum in Complex with Halofuginone and Amppnp


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 1 of Crystal Structure of Prolyl-Trna Synthetase (Prors, Proline--Trna Ligase)From Plasmodium Falciparum in Complex with Halofuginone and Amppnp within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br802

b:97.5
occ:1.00
 BR1 A:HFG802 0.0 97.5 1.0
C7 A:HFG802 2.0 65.9 1.0
C6 A:HFG802 2.9 62.6 1.0
C8 A:HFG802 2.9 65.2 1.0
CL1 A:HFG802 3.2 71.0 1.0
CG2 A:VAL339 3.5 84.7 1.0
CB A:GLU338 3.5 92.8 1.0
CB A:PRO358 3.6 58.2 1.0
O A:PHE335 3.7 94.2 1.0
C A:GLU338 3.8 84.1 1.0
CG A:PRO358 3.8 57.2 1.0
N A:VAL339 4.0 80.9 1.0
O A:GLU338 4.0 83.4 1.0
CB A:PHE335 4.1 0.6 1.0
CA A:GLU338 4.2 89.2 1.0
C5 A:HFG802 4.2 57.3 1.0
C9 A:HFG802 4.2 62.6 1.0
CA A:VAL339 4.3 79.8 1.0
C A:PHE335 4.3 0.2 1.0
OE1 A:GLU338 4.4 97.0 1.0
CB A:VAL339 4.5 82.8 1.0
N A:GLU338 4.7 89.8 1.0
CA A:PHE335 4.7 0.6 1.0
CG A:GLU338 4.7 93.5 1.0
C10 A:HFG802 4.8 62.2 1.0
CG A:PHE335 4.8 97.3 1.0
CD A:GLU338 4.8 93.3 1.0
CD1 A:PHE335 4.9 94.1 1.0
CG A:ARG390 5.0 61.4 1.0

Reference:

D.M.Dranow, T.E.Edwards, D.Lorimer, Seattle Structural Genomics Center For Infectious Disease. Crystal Structure of Prolyl-Trna Synthetase (Prors, Proline--Trna Ligase)From Plasmodium Falciparum in Complex with Halofuginone and Amppnp To Be Published.
Page generated: Wed Jul 10 22:11:30 2024

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