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Bromine in PDB 4p9o: Complex of Voltage-Gated Ion Channel in A the Presence of Channel Blocking Compound

Protein crystallography data

The structure of Complex of Voltage-Gated Ion Channel in A the Presence of Channel Blocking Compound, PDB code: 4p9o was solved by C.E.Naylor, C.Bagneris, B.A.Wallace, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 32.91 / 2.89
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 80.420, 328.370, 80.390, 90.00, 90.00, 90.00
R / Rfree (%) 21.4 / 25.1

Bromine Binding Sites:

The binding sites of Bromine atom in the Complex of Voltage-Gated Ion Channel in A the Presence of Channel Blocking Compound (pdb code 4p9o). This binding sites where shown within 5.0 Angstroms radius around Bromine atom.
In total 4 binding sites of Bromine where determined in the Complex of Voltage-Gated Ion Channel in A the Presence of Channel Blocking Compound, PDB code: 4p9o:
Jump to Bromine binding site number: 1; 2; 3; 4;

Bromine binding site 1 out of 4 in 4p9o

Go back to Bromine Binding Sites List in 4p9o
Bromine binding site 1 out of 4 in the Complex of Voltage-Gated Ion Channel in A the Presence of Channel Blocking Compound


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 1 of Complex of Voltage-Gated Ion Channel in A the Presence of Channel Blocking Compound within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Br301

b:39.9
occ:0.25
O B:HOH450 3.2 84.8 1.0
CE B:MET175 3.9 54.7 1.0
CG1 B:VAL210 4.2 96.3 1.0
CZ B:PHE214 4.5 0.5 1.0
CE1 B:PHE172 4.6 45.5 1.0
CZ B:PHE172 4.7 44.3 1.0
CG2 B:THR176 4.7 51.9 1.0
CE2 B:PHE214 4.9 0.1 1.0
CG A:MET204 4.9 68.6 1.0
CG2 A:ILE203 4.9 51.5 1.0

Bromine binding site 2 out of 4 in 4p9o

Go back to Bromine Binding Sites List in 4p9o
Bromine binding site 2 out of 4 in the Complex of Voltage-Gated Ion Channel in A the Presence of Channel Blocking Compound


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 2 of Complex of Voltage-Gated Ion Channel in A the Presence of Channel Blocking Compound within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Br304

b:38.1
occ:0.25
OG1 B:THR207 4.4 79.3 1.0
CG2 B:ILE203 4.8 50.9 1.0

Bromine binding site 3 out of 4 in 4p9o

Go back to Bromine Binding Sites List in 4p9o
Bromine binding site 3 out of 4 in the Complex of Voltage-Gated Ion Channel in A the Presence of Channel Blocking Compound


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 3 of Complex of Voltage-Gated Ion Channel in A the Presence of Channel Blocking Compound within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Br301

b:34.2
occ:0.25
CE D:MET175 3.7 54.5 1.0
CG2 D:THR176 3.9 44.4 1.0
OG1 C:THR207 4.4 73.7 1.0
CZ D:PHE172 4.4 45.1 1.0
CE1 D:PHE172 4.5 45.9 1.0
CG2 C:ILE203 4.6 46.0 1.0
CB D:THR176 4.9 47.2 1.0
CE2 D:PHE214 5.0 0.7 1.0

Bromine binding site 4 out of 4 in 4p9o

Go back to Bromine Binding Sites List in 4p9o
Bromine binding site 4 out of 4 in the Complex of Voltage-Gated Ion Channel in A the Presence of Channel Blocking Compound


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 4 of Complex of Voltage-Gated Ion Channel in A the Presence of Channel Blocking Compound within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Br303

b:37.4
occ:0.25
OG1 D:THR207 4.3 74.5 1.0
CG2 D:ILE203 4.4 45.0 1.0

Reference:

C.Bagneris, P.G.Decaen, C.E.Naylor, D.C.Pryde, I.Nobeli, D.E.Clapham, B.A.Wallace. Prokaryotic Navms Channel As A Structural and Functional Model For Eukaryotic Sodium Channel Antagonism. Proc.Natl.Acad.Sci.Usa V. 111 8428 2014.
ISSN: ESSN 1091-6490
PubMed: 24850863
DOI: 10.1073/PNAS.1406855111
Page generated: Wed Jul 10 22:15:45 2024

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