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Bromine in PDB 4r6c: X-Ray Diffraction in Temporally and Spatially Resolved Biomolecular Science: the X-Ray Crystal Structure of Hen Egg White Lysozyme Cocrystallized with TA6BR12 and Then A Crystal Soaked in K2PTBR6

Enzymatic activity of X-Ray Diffraction in Temporally and Spatially Resolved Biomolecular Science: the X-Ray Crystal Structure of Hen Egg White Lysozyme Cocrystallized with TA6BR12 and Then A Crystal Soaked in K2PTBR6

All present enzymatic activity of X-Ray Diffraction in Temporally and Spatially Resolved Biomolecular Science: the X-Ray Crystal Structure of Hen Egg White Lysozyme Cocrystallized with TA6BR12 and Then A Crystal Soaked in K2PTBR6:
3.2.1.17;

Protein crystallography data

The structure of X-Ray Diffraction in Temporally and Spatially Resolved Biomolecular Science: the X-Ray Crystal Structure of Hen Egg White Lysozyme Cocrystallized with TA6BR12 and Then A Crystal Soaked in K2PTBR6, PDB code: 4r6c was solved by J.R.Helliwell, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 22.36 / 1.70
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 79.070, 79.070, 37.235, 90.00, 90.00, 90.00
R / Rfree (%) 18 / 23

Other elements in 4r6c:

The structure of X-Ray Diffraction in Temporally and Spatially Resolved Biomolecular Science: the X-Ray Crystal Structure of Hen Egg White Lysozyme Cocrystallized with TA6BR12 and Then A Crystal Soaked in K2PTBR6 also contains other interesting chemical elements:

Platinum (Pt) 2 atoms
Tantalum (Ta) 12 atoms
Chlorine (Cl) 12 atoms
Sodium (Na) 2 atoms

Bromine Binding Sites:

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 20; Page 3, Binding sites: 21 - 30; Page 4, Binding sites: 31 - 31;

Binding sites:

The binding sites of Bromine atom in the X-Ray Diffraction in Temporally and Spatially Resolved Biomolecular Science: the X-Ray Crystal Structure of Hen Egg White Lysozyme Cocrystallized with TA6BR12 and Then A Crystal Soaked in K2PTBR6 (pdb code 4r6c). This binding sites where shown within 5.0 Angstroms radius around Bromine atom.
In total 31 binding sites of Bromine where determined in the X-Ray Diffraction in Temporally and Spatially Resolved Biomolecular Science: the X-Ray Crystal Structure of Hen Egg White Lysozyme Cocrystallized with TA6BR12 and Then A Crystal Soaked in K2PTBR6, PDB code: 4r6c:
Jump to Bromine binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Bromine binding site 1 out of 31 in 4r6c

Go back to Bromine Binding Sites List in 4r6c
Bromine binding site 1 out of 31 in the X-Ray Diffraction in Temporally and Spatially Resolved Biomolecular Science: the X-Ray Crystal Structure of Hen Egg White Lysozyme Cocrystallized with TA6BR12 and Then A Crystal Soaked in K2PTBR6


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 1 of X-Ray Diffraction in Temporally and Spatially Resolved Biomolecular Science: the X-Ray Crystal Structure of Hen Egg White Lysozyme Cocrystallized with TA6BR12 and Then A Crystal Soaked in K2PTBR6 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br201

b:33.1
occ:0.43
BR1 A:TBR201 0.0 33.1 0.4
TA2 A:TBR201 2.5 29.3 0.4
TA1 A:TBR201 2.6 26.9 0.4
BR5 A:TBR201 3.5 28.4 0.4
BR4 A:TBR201 3.6 27.4 0.4
BR2 A:TBR201 3.6 30.9 0.4
BRC A:TBR201 3.7 30.4 0.4
TA3 A:TBR201 4.1 26.2 0.4
TA6 A:TBR201 4.1 24.0 0.4

Bromine binding site 2 out of 31 in 4r6c

Go back to Bromine Binding Sites List in 4r6c
Bromine binding site 2 out of 31 in the X-Ray Diffraction in Temporally and Spatially Resolved Biomolecular Science: the X-Ray Crystal Structure of Hen Egg White Lysozyme Cocrystallized with TA6BR12 and Then A Crystal Soaked in K2PTBR6


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 2 of X-Ray Diffraction in Temporally and Spatially Resolved Biomolecular Science: the X-Ray Crystal Structure of Hen Egg White Lysozyme Cocrystallized with TA6BR12 and Then A Crystal Soaked in K2PTBR6 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br201

b:30.9
occ:0.43
BR2 A:TBR201 0.0 30.9 0.4
TA3 A:TBR201 2.6 26.2 0.4
TA1 A:TBR201 2.6 26.9 0.4
BR3 A:TBR201 3.4 22.5 0.4
BR A:BR205 3.6 31.4 0.4
BR6 A:TBR201 3.6 25.5 0.4
BR1 A:TBR201 3.6 33.1 0.4
BR5 A:TBR201 3.7 28.4 0.4
TA5 A:TBR201 4.1 23.4 0.4
TA2 A:TBR201 4.2 29.3 0.4
O A:HOH381 4.9 14.3 1.0

Bromine binding site 3 out of 31 in 4r6c

Go back to Bromine Binding Sites List in 4r6c
Bromine binding site 3 out of 31 in the X-Ray Diffraction in Temporally and Spatially Resolved Biomolecular Science: the X-Ray Crystal Structure of Hen Egg White Lysozyme Cocrystallized with TA6BR12 and Then A Crystal Soaked in K2PTBR6


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 3 of X-Ray Diffraction in Temporally and Spatially Resolved Biomolecular Science: the X-Ray Crystal Structure of Hen Egg White Lysozyme Cocrystallized with TA6BR12 and Then A Crystal Soaked in K2PTBR6 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br201

b:22.5
occ:0.43
BR3 A:TBR201 0.0 22.5 0.4
TA5 A:TBR201 2.5 23.4 0.4
TA1 A:TBR201 2.6 26.9 0.4
BR2 A:TBR201 3.4 30.9 0.4
BRB A:TBR201 3.5 24.6 0.4
BR4 A:TBR201 3.7 27.4 0.4
BR6 A:TBR201 3.8 25.5 0.4
OXT A:LEU129 4.0 77.4 1.0
TA3 A:TBR201 4.0 26.2 0.4
TA6 A:TBR201 4.2 24.0 0.4

Bromine binding site 4 out of 31 in 4r6c

Go back to Bromine Binding Sites List in 4r6c
Bromine binding site 4 out of 31 in the X-Ray Diffraction in Temporally and Spatially Resolved Biomolecular Science: the X-Ray Crystal Structure of Hen Egg White Lysozyme Cocrystallized with TA6BR12 and Then A Crystal Soaked in K2PTBR6


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 4 of X-Ray Diffraction in Temporally and Spatially Resolved Biomolecular Science: the X-Ray Crystal Structure of Hen Egg White Lysozyme Cocrystallized with TA6BR12 and Then A Crystal Soaked in K2PTBR6 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br201

b:27.4
occ:0.43
BR4 A:TBR201 0.0 27.4 0.4
TA6 A:TBR201 2.6 24.0 0.4
TA1 A:TBR201 2.6 26.9 0.4
OE1 A:GLN121 3.3 48.5 1.0
BRB A:TBR201 3.6 24.6 0.4
BRC A:TBR201 3.6 30.4 0.4
BR1 A:TBR201 3.6 33.1 0.4
BR3 A:TBR201 3.7 22.5 0.4
TA2 A:TBR201 4.1 29.3 0.4
TA5 A:TBR201 4.2 23.4 0.4
CD A:GLN121 4.5 44.2 1.0

Bromine binding site 5 out of 31 in 4r6c

Go back to Bromine Binding Sites List in 4r6c
Bromine binding site 5 out of 31 in the X-Ray Diffraction in Temporally and Spatially Resolved Biomolecular Science: the X-Ray Crystal Structure of Hen Egg White Lysozyme Cocrystallized with TA6BR12 and Then A Crystal Soaked in K2PTBR6


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 5 of X-Ray Diffraction in Temporally and Spatially Resolved Biomolecular Science: the X-Ray Crystal Structure of Hen Egg White Lysozyme Cocrystallized with TA6BR12 and Then A Crystal Soaked in K2PTBR6 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br201

b:28.4
occ:0.43
BR5 A:TBR201 0.0 28.4 0.4
BR A:BR205 2.3 31.4 0.4
TA2 A:TBR201 2.5 29.3 0.4
TA3 A:TBR201 2.6 26.2 0.4
BR9 A:TBR201 3.4 26.1 0.4
BR1 A:TBR201 3.5 33.1 0.4
BRA A:TBR201 3.7 25.3 0.4
BR2 A:TBR201 3.7 30.9 0.4
TA4 A:TBR201 4.1 22.2 0.4
TA1 A:TBR201 4.1 26.9 0.4
BR6 A:TBR201 4.9 25.5 0.4

Bromine binding site 6 out of 31 in 4r6c

Go back to Bromine Binding Sites List in 4r6c
Bromine binding site 6 out of 31 in the X-Ray Diffraction in Temporally and Spatially Resolved Biomolecular Science: the X-Ray Crystal Structure of Hen Egg White Lysozyme Cocrystallized with TA6BR12 and Then A Crystal Soaked in K2PTBR6


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 6 of X-Ray Diffraction in Temporally and Spatially Resolved Biomolecular Science: the X-Ray Crystal Structure of Hen Egg White Lysozyme Cocrystallized with TA6BR12 and Then A Crystal Soaked in K2PTBR6 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br201

b:25.5
occ:0.43
BR6 A:TBR201 0.0 25.5 0.4
TA3 A:TBR201 2.4 26.2 0.4
TA5 A:TBR201 2.7 23.4 0.4
NZ A:LYS13 2.8 37.3 1.0
BRA A:TBR201 3.2 25.3 0.4
OXT A:LEU129 3.3 77.4 1.0
BR A:BR205 3.3 31.4 0.4
CE A:LYS13 3.4 37.9 1.0
BR7 A:TBR201 3.5 21.1 0.4
BR2 A:TBR201 3.6 30.9 0.4
BR3 A:TBR201 3.8 22.5 0.4
TA4 A:TBR201 3.9 22.2 0.4
C A:LEU129 4.2 57.8 1.0
TA1 A:TBR201 4.3 26.9 0.4
O A:HOH381 4.5 14.3 1.0
O A:LEU129 4.6 60.1 1.0
CD A:LYS13 4.6 31.6 1.0
CL A:CL218 4.9 27.2 1.0
BR5 A:TBR201 4.9 28.4 0.4

Bromine binding site 7 out of 31 in 4r6c

Go back to Bromine Binding Sites List in 4r6c
Bromine binding site 7 out of 31 in the X-Ray Diffraction in Temporally and Spatially Resolved Biomolecular Science: the X-Ray Crystal Structure of Hen Egg White Lysozyme Cocrystallized with TA6BR12 and Then A Crystal Soaked in K2PTBR6


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 7 of X-Ray Diffraction in Temporally and Spatially Resolved Biomolecular Science: the X-Ray Crystal Structure of Hen Egg White Lysozyme Cocrystallized with TA6BR12 and Then A Crystal Soaked in K2PTBR6 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br201

b:21.1
occ:0.43
BR7 A:TBR201 0.0 21.1 0.4
TA5 A:TBR201 2.6 23.4 0.4
TA4 A:TBR201 2.6 22.2 0.4
OD2 A:ASP18 3.2 26.0 1.0
CD A:LYS13 3.3 31.6 1.0
CE A:LYS13 3.4 37.9 1.0
BR6 A:TBR201 3.5 25.5 0.4
BRB A:TBR201 3.5 24.6 0.4
BR8 A:TBR201 3.6 21.6 0.4
CD2 A:LEU25 3.7 19.7 1.0
BRA A:TBR201 3.7 25.3 0.4
CB A:LEU129 3.8 44.4 1.0
NZ A:LYS13 3.9 37.3 1.0
CG A:ASP18 4.1 23.3 1.0
CD1 A:LEU129 4.1 46.5 1.0
CG A:LYS13 4.1 25.6 1.0
TA3 A:TBR201 4.2 26.2 0.4
TA6 A:TBR201 4.2 24.0 0.4
OXT A:LEU129 4.3 77.4 1.0
CG A:LEU129 4.4 44.9 1.0
CD2 A:LEU129 4.6 43.1 1.0
C A:LEU129 4.7 57.8 1.0
CB A:LYS13 4.8 21.4 1.0
CB A:ASP18 4.8 20.6 1.0
CA A:LEU129 4.9 47.4 1.0
OD1 A:ASP18 4.9 26.4 1.0
CB A:LEU25 4.9 15.2 1.0
CG A:LEU25 5.0 16.2 1.0

Bromine binding site 8 out of 31 in 4r6c

Go back to Bromine Binding Sites List in 4r6c
Bromine binding site 8 out of 31 in the X-Ray Diffraction in Temporally and Spatially Resolved Biomolecular Science: the X-Ray Crystal Structure of Hen Egg White Lysozyme Cocrystallized with TA6BR12 and Then A Crystal Soaked in K2PTBR6


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 8 of X-Ray Diffraction in Temporally and Spatially Resolved Biomolecular Science: the X-Ray Crystal Structure of Hen Egg White Lysozyme Cocrystallized with TA6BR12 and Then A Crystal Soaked in K2PTBR6 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br201

b:21.6
occ:0.43
BR8 A:TBR201 0.0 21.6 0.4
TA4 A:TBR201 2.6 22.2 0.4
TA6 A:TBR201 2.6 24.0 0.4
OD1 A:ASP18 3.0 26.4 1.0
OD2 A:ASP18 3.2 26.0 1.0
CD1 A:ILE124 3.2 30.2 1.0
CG A:ASP18 3.4 23.3 1.0
CB A:LEU25 3.4 15.2 1.0
BR9 A:TBR201 3.6 26.1 0.4
BRC A:TBR201 3.6 30.4 0.4
BR7 A:TBR201 3.6 21.1 0.4
BRB A:TBR201 3.6 24.6 0.4
N A:LEU25 3.8 13.3 1.0
TA2 A:TBR201 4.2 29.3 0.4
CL A:CL212 4.2 21.5 1.0
TA5 A:TBR201 4.2 23.4 0.4
CA A:LEU25 4.2 13.6 1.0
CD2 A:LEU25 4.3 19.7 1.0
CG A:LEU25 4.6 16.2 1.0
CB A:SER24 4.7 15.4 1.0
CG1 A:ILE124 4.8 24.7 1.0
C A:SER24 4.8 13.8 1.0
CB A:ASP18 4.8 20.6 1.0
N A:GLY26 4.8 12.6 1.0
CA A:SER24 5.0 13.8 1.0

Bromine binding site 9 out of 31 in 4r6c

Go back to Bromine Binding Sites List in 4r6c
Bromine binding site 9 out of 31 in the X-Ray Diffraction in Temporally and Spatially Resolved Biomolecular Science: the X-Ray Crystal Structure of Hen Egg White Lysozyme Cocrystallized with TA6BR12 and Then A Crystal Soaked in K2PTBR6


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 9 of X-Ray Diffraction in Temporally and Spatially Resolved Biomolecular Science: the X-Ray Crystal Structure of Hen Egg White Lysozyme Cocrystallized with TA6BR12 and Then A Crystal Soaked in K2PTBR6 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br201

b:26.1
occ:0.43
BR9 A:TBR201 0.0 26.1 0.4
TA4 A:TBR201 2.5 22.2 0.4
TA2 A:TBR201 2.6 29.3 0.4
OD2 A:ASP18 2.8 26.0 1.0
ND2 A:ASN19 2.9 42.1 1.0
OD1 A:ASP18 3.0 26.4 1.0
CG A:ASP18 3.2 23.3 1.0
BR5 A:TBR201 3.4 28.4 0.4
BR8 A:TBR201 3.6 21.6 0.4
BRC A:TBR201 3.6 30.4 0.4
BRA A:TBR201 3.6 25.3 0.4
TA3 A:TBR201 4.0 26.2 0.4
TA6 A:TBR201 4.1 24.0 0.4
CG A:ASN19 4.1 33.2 1.0
BR A:BR205 4.4 31.4 0.4
CB A:ASP18 4.6 20.6 1.0
CB A:ASN19 4.7 24.1 1.0
N A:ASN19 4.8 16.1 1.0
C A:ASP18 4.9 18.9 1.0

Bromine binding site 10 out of 31 in 4r6c

Go back to Bromine Binding Sites List in 4r6c
Bromine binding site 10 out of 31 in the X-Ray Diffraction in Temporally and Spatially Resolved Biomolecular Science: the X-Ray Crystal Structure of Hen Egg White Lysozyme Cocrystallized with TA6BR12 and Then A Crystal Soaked in K2PTBR6


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 10 of X-Ray Diffraction in Temporally and Spatially Resolved Biomolecular Science: the X-Ray Crystal Structure of Hen Egg White Lysozyme Cocrystallized with TA6BR12 and Then A Crystal Soaked in K2PTBR6 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br201

b:25.3
occ:0.43
BRA A:TBR201 0.0 25.3 0.4
BR A:BR205 2.4 31.4 0.4
TA4 A:TBR201 2.7 22.2 0.4
TA3 A:TBR201 2.7 26.2 0.4
OD2 A:ASP18 2.7 26.0 1.0
BR6 A:TBR201 3.2 25.5 0.4
BR9 A:TBR201 3.6 26.1 0.4
CE A:LYS13 3.7 37.9 1.0
BR7 A:TBR201 3.7 21.1 0.4
BR5 A:TBR201 3.7 28.4 0.4
CG A:ASP18 3.9 23.3 1.0
TA5 A:TBR201 4.2 23.4 0.4
TA2 A:TBR201 4.3 29.3 0.4
NZ A:LYS13 4.3 37.3 1.0
CB A:ASP18 4.5 20.6 1.0
CD A:LYS13 4.6 31.6 1.0
OD1 A:ASP18 4.8 26.4 1.0
CG A:LYS13 4.9 25.6 1.0

Reference:

J.R.Helliwell, A.Brink, S.Kaenket, V.L.Starkey, S.W.Tanley. X-Ray Diffraction in Temporally and Spatially Resolved Biomolecular Science. Faraday Discuss 2015.
PubMed: 25605312
DOI: 10.1039/C4FD00166D
Page generated: Sat Dec 12 02:22:43 2020

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