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Bromine in PDB 5c5v: Recombinant Inorganic Pyrophosphatase From T Brucei Brucei

Protein crystallography data

The structure of Recombinant Inorganic Pyrophosphatase From T Brucei Brucei, PDB code: 5c5v was solved by A.Jamwal, M.Yogavel, A.Sharma, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 39.83 / 2.35
Space group P 42 21 2
Cell size a, b, c (Å), α, β, γ (°) 104.210, 104.210, 215.513, 90.00, 90.00, 90.00
R / Rfree (%) 19.9 / 23.8

Other elements in 5c5v:

The structure of Recombinant Inorganic Pyrophosphatase From T Brucei Brucei also contains other interesting chemical elements:

Magnesium (Mg) 8 atoms
Chlorine (Cl) 6 atoms

Bromine Binding Sites:

The binding sites of Bromine atom in the Recombinant Inorganic Pyrophosphatase From T Brucei Brucei (pdb code 5c5v). This binding sites where shown within 5.0 Angstroms radius around Bromine atom.
In total only one binding site of Bromine was determined in the Recombinant Inorganic Pyrophosphatase From T Brucei Brucei, PDB code: 5c5v:

Bromine binding site 1 out of 1 in 5c5v

Go back to Bromine Binding Sites List in 5c5v
Bromine binding site 1 out of 1 in the Recombinant Inorganic Pyrophosphatase From T Brucei Brucei


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 1 of Recombinant Inorganic Pyrophosphatase From T Brucei Brucei within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Br509

b:78.3
occ:0.41
O B:HOH624 3.2 65.3 1.0
NE B:ARG213 3.4 67.1 1.0
CG B:MET221 3.4 73.3 1.0
CB B:MET221 3.6 71.5 1.0
CA B:MET221 3.8 70.8 1.0
NH2 B:ARG213 3.9 65.6 1.0
CZ B:ARG213 4.1 67.0 1.0
CD B:ARG213 4.4 67.9 1.0
N B:ASN222 4.4 62.0 1.0
CB B:ARG223 4.5 60.1 1.0
C B:MET221 4.6 69.4 1.0
CD B:LYS215 4.7 67.4 1.0
O B:VAL208 4.7 62.6 1.0
N B:MET221 4.9 71.5 1.0
CE B:MET221 4.9 74.6 1.0
SD B:MET221 5.0 76.1 1.0

Reference:

A.Jamwal, A.R.Round, L.Bannwarth, C.Venien-Bryan, H.Belrhali, M.Yogavel, A.Sharma. Structural and Functional Highlights of Vacuolar Soluble Protein 1 From Pathogen Trypanosoma Brucei Brucei J.Biol.Chem. V. 290 30498 2015.
ISSN: ESSN 1083-351X
PubMed: 26494625
DOI: 10.1074/JBC.M115.674176
Page generated: Wed Jul 10 23:21:51 2024

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