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Bromine in PDB 5iwo: Bacterial Sodium Channel Pore Domain, Low Bromide

Protein crystallography data

The structure of Bacterial Sodium Channel Pore Domain, Low Bromide, PDB code: 5iwo was solved by D.Shaya, F.Findeisen, A.Rohaim, D.L.Minor, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 15.00 / 3.33
Space group I 2 2 2
Cell size a, b, c (Å), α, β, γ (°) 151.720, 159.950, 168.570, 90.00, 90.00, 90.00
R / Rfree (%) 20.9 / 26.2

Bromine Binding Sites:

The binding sites of Bromine atom in the Bacterial Sodium Channel Pore Domain, Low Bromide (pdb code 5iwo). This binding sites where shown within 5.0 Angstroms radius around Bromine atom.
In total only one binding site of Bromine was determined in the Bacterial Sodium Channel Pore Domain, Low Bromide, PDB code: 5iwo:

Bromine binding site 1 out of 1 in 5iwo

Go back to Bromine Binding Sites List in 5iwo
Bromine binding site 1 out of 1 in the Bacterial Sodium Channel Pore Domain, Low Bromide


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 1 of Bacterial Sodium Channel Pore Domain, Low Bromide within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br301

b:0.9
occ:1.00
CD A:ARG264 2.6 1.0 1.0
CD C:ARG264 2.7 96.3 1.0
NE A:ARG264 3.0 0.5 1.0
NE C:ARG264 3.1 0.0 1.0
CD D:ARG264 3.1 0.0 1.0
NE D:ARG264 3.4 0.1 1.0
CG A:ARG264 3.4 0.5 1.0
CG C:ARG264 3.5 96.5 1.0
NE B:ARG264 3.6 0.1 1.0
CG D:ARG264 3.7 0.9 1.0
CD B:ARG264 3.9 99.8 1.0
CZ A:ARG264 4.3 0.5 1.0
CZ C:ARG264 4.4 0.8 1.0
CG B:ARG264 4.7 0.1 1.0
CZ D:ARG264 4.7 0.0 1.0
CZ B:ARG264 4.7 0.1 1.0
CB A:ARG264 5.0 0.0 1.0

Reference:

C.Arrigoni, A.Rohaim, D.Shaya, F.Findeisen, R.A.Stein, S.R.Nurva, S.Mishra, H.S.Mchaourab, D.L.Minor. Unfolding of A Temperature-Sensitive Domain Controls Voltage-Gated Channel Activation. Cell V. 164 922 2016.
ISSN: ISSN 1097-4172
PubMed: 26919429
DOI: 10.1016/J.CELL.2016.02.001
Page generated: Sat Dec 12 02:27:00 2020

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