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Bromine in PDB 5m76: Crystal Structure of Cardiotoxic Bence-Jones Light Chain Dimer H10

Protein crystallography data

The structure of Crystal Structure of Cardiotoxic Bence-Jones Light Chain Dimer H10, PDB code: 5m76 was solved by L.Oberti, P.Rognoni, J.Bacarizo, M.Bolognesi, S.Ricagno, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.95 / 2.50
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 55.493, 71.417, 103.929, 90.00, 90.00, 90.00
R / Rfree (%) 23.9 / 28.2

Bromine Binding Sites:

The binding sites of Bromine atom in the Crystal Structure of Cardiotoxic Bence-Jones Light Chain Dimer H10 (pdb code 5m76). This binding sites where shown within 5.0 Angstroms radius around Bromine atom.
In total only one binding site of Bromine was determined in the Crystal Structure of Cardiotoxic Bence-Jones Light Chain Dimer H10, PDB code: 5m76:

Bromine binding site 1 out of 1 in 5m76

Go back to Bromine Binding Sites List in 5m76
Bromine binding site 1 out of 1 in the Crystal Structure of Cardiotoxic Bence-Jones Light Chain Dimer H10


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 1 of Crystal Structure of Cardiotoxic Bence-Jones Light Chain Dimer H10 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Br301

b:64.3
occ:1.00
N B:VAL34 3.3 41.9 1.0
NZ B:LYS66 3.3 36.4 1.0
CA B:PRO33 3.5 39.4 1.0
CE B:LYS66 3.6 38.3 1.0
OD1 B:ASN52 3.9 49.9 1.0
C B:PRO33 3.9 41.5 1.0
CA B:GLY51 3.9 46.3 1.0
CD B:LYS66 3.9 38.9 1.0
CG2 B:VAL34 4.0 39.7 1.0
O B:TYR32 4.1 39.7 1.0
CB B:VAL34 4.2 41.4 1.0
ND2 B:ASN52 4.3 44.8 1.0
CB B:PRO33 4.3 40.0 1.0
CA B:VAL34 4.3 42.6 1.0
CG B:ASN52 4.3 48.4 1.0
C B:GLY51 4.4 47.7 1.0
N B:PRO33 4.6 37.1 1.0
N B:GLY51 4.6 44.6 1.0
N B:ASN52 4.6 47.0 1.0
O B:VAL34 4.7 50.5 1.0
C B:TYR32 4.7 35.5 1.0
CB B:LYS66 4.7 40.6 1.0
CG B:LYS66 5.0 39.4 1.0

Reference:

L.Oberti, P.Rognoni, A.Barbiroli, F.Lavatelli, R.Russo, M.Maritan, G.Palladini, M.Bolognesi, G.Merlini, S.Ricagno. Concurrent Structural and Biophysical Traits Link with Immunoglobulin Light Chains Amyloid Propensity. Sci Rep V. 7 16809 2017.
ISSN: ESSN 2045-2322
PubMed: 29196671
DOI: 10.1038/S41598-017-16953-7
Page generated: Sat Dec 12 02:27:46 2020

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