Bromine in PDB 5s41: Pandda Analysis Group Deposition -- Crystal Structure of Sars-Cov-2 NSP3 Macrodomain in Complex with Ncl-00023825

The structure of Pandda Analysis Group Deposition -- Crystal Structure of Sars-Cov-2 NSP3 Macrodomain in Complex with Ncl-00023825, PDB code: 5s41 was solved by D.Fearon, M.Schuller, V.L.Rangel, A.Douangamath, J.G.M.Rack, K.Zhu, A.Aimon, J.Brandao-Neto, A.Dias, L.Dunnet, T.J.Gorrie-Stone, A.J.Powell, T.Krojer, R.Skyner, W.Thompson, I.Ahel, F.Von Delft, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	88.29 / 1.19
Space group	P 43
Cell size a, b, c (Å), α, β, γ (°)	88.29, 88.29, 39.152, 90, 90, 90
R / Rfree (%)	16.7 / 21.3

The binding sites of Bromine atom in the Pandda Analysis Group Deposition -- Crystal Structure of Sars-Cov-2 NSP3 Macrodomain in Complex with Ncl-00023825 (pdb code 5s41). This binding sites where shown within 5.0 Angstroms radius around Bromine atom.
In total only one binding site of Bromine was determined in the Pandda Analysis Group Deposition -- Crystal Structure of Sars-Cov-2 NSP3 Macrodomain in Complex with Ncl-00023825, PDB code: 5s41:

Bromine binding site 1 out of 1 in the Pandda Analysis Group Deposition -- Crystal Structure of Sars-Cov-2 NSP3 Macrodomain in Complex with Ncl-00023825


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 1 of Pandda Analysis Group Deposition -- Crystal Structure of Sars-Cov-2 NSP3 Macrodomain in Complex with Ncl-00023825 within 5.0Å range: probe atom residue distance (Å) B Occ A:Br401 b:30.1 occ:0.55 BR1 A:HGQ401 0.0 30.1 0.6 C3 A:HGQ401 1.9 25.7 0.6 C2 A:HGQ401 2.8 25.2 0.6 C4 A:HGQ401 2.9 25.6 0.6 O A:HOH639 3.6 15.5 1.0 O A:HOH702 3.7 31.4 1.0 CG2 A:VAL49 3.7 15.1 1.0 O A:HOH665 3.8 14.5 0.5 N A:VAL49 3.8 14.4 1.0 C5 A:HGQ401 4.1 24.7 0.6 C A:GLY48 4.1 14.8 1.0 C1 A:HGQ401 4.1 24.6 0.6 O A:HOH688 4.2 17.2 0.5 CA A:GLY48 4.3 14.9 1.0 O A:HOH726 4.4 34.0 1.0 CA A:VAL49 4.4 14.7 1.0 CB A:PHE156 4.4 21.6 1.0 CD2 A:PHE156 4.5 22.4 1.0 N1 A:HGQ401 4.6 24.3 0.6 CG A:PHE156 4.6 22.6 1.0 CB A:VAL49 4.7 15.0 1.0 O A:GLY48 4.8 14.7 1.0 O A:HOH655 4.8 15.1 1.0

D.Fearon, M.Schuller, V.L.Rangel, A.Douangamath, J.G.M.Rack, K.Zhu, A.Aimon, J.Brandao-Neto, A.Dias, L.Dunnet, T.J.Gorrie-Stone, A.J.Powell, T.Krojer, R.Skyner, W.Thompson, I.Ahel, F.Von Delft. Pandda Analysis Group Deposition To Be Published.