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Bromine in PDB 5ur4: 1.5 A Crystal Structure of PYR1 Bound to Pyrabactin

Protein crystallography data

The structure of 1.5 A Crystal Structure of PYR1 Bound to Pyrabactin, PDB code: 5ur4 was solved by F.C.Peterson, D.R.Jensen, B.F.Volkman, S.R.Cutler, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.37 / 1.52
Space group P 64 2 2
Cell size a, b, c (Å), α, β, γ (°) 98.427, 98.427, 71.467, 90.00, 90.00, 120.00
R / Rfree (%) 16.6 / 18.7

Bromine Binding Sites:

The binding sites of Bromine atom in the 1.5 A Crystal Structure of PYR1 Bound to Pyrabactin (pdb code 5ur4). This binding sites where shown within 5.0 Angstroms radius around Bromine atom.
In total only one binding site of Bromine was determined in the 1.5 A Crystal Structure of PYR1 Bound to Pyrabactin, PDB code: 5ur4:

Bromine binding site 1 out of 1 in 5ur4

Go back to Bromine Binding Sites List in 5ur4
Bromine binding site 1 out of 1 in the 1.5 A Crystal Structure of PYR1 Bound to Pyrabactin


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 1 of 1.5 A Crystal Structure of PYR1 Bound to Pyrabactin within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br201

b:17.9
occ:0.16
BR A:PYV201 0.0 17.9 0.2
C1 A:PYV201 1.9 16.9 0.9
C6 A:PYV201 2.8 21.5 1.0
C2 A:PYV201 2.9 18.6 0.9
C10 A:PYV201 3.1 20.0 1.0
CE1 A:PHE159 3.4 48.8 1.0
CD1 A:PHE159 3.7 46.5 1.0
CD A:PRO88 4.1 26.3 1.0
CG2 A:VAL163 4.1 18.2 1.0
C5 A:PYV201 4.1 19.1 1.0
C3 A:PYV201 4.2 17.6 1.0
CG A:PRO88 4.2 28.6 1.0
CB A:LEU87 4.4 20.0 1.0
CD1 A:LEU87 4.4 28.5 1.0
C9 A:PYV201 4.4 18.4 1.0
CZ A:PHE159 4.5 56.0 1.0
CD2 A:LEU87 4.6 33.7 1.0
CB A:ALA89 4.7 20.6 1.0
C4 A:PYV201 4.7 14.7 1.0
CG A:LEU87 4.7 26.1 1.0
N A:PRO88 4.8 21.5 1.0
CG A:PHE159 5.0 40.2 1.0

Reference:

F.C.Peterson, S.R.Cutler. 1.5 A Crystal Structure of PYR1 Bound to Pyrabactin To Be Published.
Page generated: Thu Jul 11 01:12:15 2024

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