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Bromine in PDB 6b79: Curved Pair of Sheets Formed From SOD1 Residues 28-38 with Familial Mutation G37R.

Enzymatic activity of Curved Pair of Sheets Formed From SOD1 Residues 28-38 with Familial Mutation G37R.

All present enzymatic activity of Curved Pair of Sheets Formed From SOD1 Residues 28-38 with Familial Mutation G37R.:
1.15.1.1;

Protein crystallography data

The structure of Curved Pair of Sheets Formed From SOD1 Residues 28-38 with Familial Mutation G37R., PDB code: 6b79 was solved by S.Sangwan, M.R.Sawaya, D.S.Eisenberg, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 35.73 / 1.80
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 56.940, 11.640, 44.930, 90.00, 127.32, 90.00
R / Rfree (%) 23 / 26.7

Bromine Binding Sites:

The binding sites of Bromine atom in the Curved Pair of Sheets Formed From SOD1 Residues 28-38 with Familial Mutation G37R. (pdb code 6b79). This binding sites where shown within 5.0 Angstroms radius around Bromine atom.
In total 2 binding sites of Bromine where determined in the Curved Pair of Sheets Formed From SOD1 Residues 28-38 with Familial Mutation G37R., PDB code: 6b79:
Jump to Bromine binding site number: 1; 2;

Bromine binding site 1 out of 2 in 6b79

Go back to Bromine Binding Sites List in 6b79
Bromine binding site 1 out of 2 in the Curved Pair of Sheets Formed From SOD1 Residues 28-38 with Familial Mutation G37R.


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 1 of Curved Pair of Sheets Formed From SOD1 Residues 28-38 with Familial Mutation G37R. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br2

b:28.2
occ:0.65
BR A:A8E2 0.0 28.2 0.7
CG A:A8E2 1.9 26.0 1.0
CD1 A:A8E2 2.9 26.6 1.0
CB A:A8E2 2.9 21.6 1.0
CA A:A8E2 3.6 19.1 1.0
O A:LYS1 4.0 23.0 1.0
CG B:LEU11 4.1 29.1 1.0
CD1 B:LEU11 4.2 29.2 1.0
CD2 B:LEU11 4.2 31.0 1.0
N A:A8E2 4.3 19.8 1.0
C A:LYS1 4.5 25.5 1.0
C A:A8E2 4.8 20.2 1.0

Bromine binding site 2 out of 2 in 6b79

Go back to Bromine Binding Sites List in 6b79
Bromine binding site 2 out of 2 in the Curved Pair of Sheets Formed From SOD1 Residues 28-38 with Familial Mutation G37R.


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 2 of Curved Pair of Sheets Formed From SOD1 Residues 28-38 with Familial Mutation G37R. within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Br2

b:36.0
occ:0.65
BR B:A8E2 0.0 36.0 0.7
CG B:A8E2 1.9 32.1 1.0
CD1 B:A8E2 2.9 33.6 1.0
CB B:A8E2 3.0 25.8 1.0
CA B:A8E2 3.6 22.3 1.0
O B:LYS1 4.0 26.6 1.0
N B:A8E2 4.3 22.2 1.0
C B:LYS1 4.5 27.1 1.0
CD2 A:LEU11 4.6 40.1 1.0
C B:A8E2 4.8 25.1 1.0
CD1 A:LEU11 5.0 38.8 1.0

Reference:

S.Sangwan, M.R.Sawaya, K.A.Murray, M.P.Hughes, D.S.Eisenberg. Atomic Structures of Corkscrew-Forming Segments of SOD1 Reveal Varied Oligomer Conformations. Protein Sci. V. 27 1231 2018.
ISSN: ESSN 1469-896X
PubMed: 29453800
DOI: 10.1002/PRO.3391
Page generated: Thu Jul 11 01:28:20 2024

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