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Bromine in PDB 6d6l: The Structure of Ligand Binding Domain of Lasr in Complex with Tp-1 Homolog, Compound 14
Protein crystallography data
The structure of The Structure of Ligand Binding Domain of Lasr in Complex with Tp-1 Homolog, Compound 14, PDB code: 6d6l
was solved by
S.H.Dong,
S.K.Nair,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 25.00 / 1.63 |
| Space group | P 1 21 1 |
| Cell size a, b, c (Å), α, β, γ (°) | 56.120, 84.550, 76.990, 90.00, 101.09, 90.00 |
| R / Rfree (%) | 22 / 24 |
Other elements in 6d6l:
The structure of The Structure of Ligand Binding Domain of Lasr in Complex with Tp-1 Homolog, Compound 14 also contains other interesting chemical elements:
| Chlorine | (Cl) | 4 atoms |
Bromine Binding Sites:
The binding sites of Bromine atom in the The Structure of Ligand Binding Domain of Lasr in Complex with Tp-1 Homolog, Compound 14
(pdb code 6d6l). This binding sites where shown within
5.0 Angstroms radius around Bromine atom.
In total 8 binding sites of Bromine where determined in the The Structure of Ligand Binding Domain of Lasr in Complex with Tp-1 Homolog, Compound 14, PDB code: 6d6l:
Jump to Bromine binding site number: 1; 2; 3; 4; 5; 6; 7; 8;
In total 8 binding sites of Bromine where determined in the The Structure of Ligand Binding Domain of Lasr in Complex with Tp-1 Homolog, Compound 14, PDB code: 6d6l:
Jump to Bromine binding site number: 1; 2; 3; 4; 5; 6; 7; 8;
Bromine binding site 1 out of 8 in 6d6l
Go back to
Bromine Binding Sites List in 6d6l
Bromine binding site 1 out
of 8 in the The Structure of Ligand Binding Domain of Lasr in Complex with Tp-1 Homolog, Compound 14
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Bromine with other atoms in the Br binding
site number 1 of The Structure of Ligand Binding Domain of Lasr in Complex with Tp-1 Homolog, Compound 14 within 5.0Å range:
|
Bromine binding site 2 out of 8 in 6d6l
Go back to
Bromine Binding Sites List in 6d6l
Bromine binding site 2 out
of 8 in the The Structure of Ligand Binding Domain of Lasr in Complex with Tp-1 Homolog, Compound 14
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Bromine with other atoms in the Br binding
site number 2 of The Structure of Ligand Binding Domain of Lasr in Complex with Tp-1 Homolog, Compound 14 within 5.0Å range:
|
Bromine binding site 3 out of 8 in 6d6l
Go back to
Bromine Binding Sites List in 6d6l
Bromine binding site 3 out
of 8 in the The Structure of Ligand Binding Domain of Lasr in Complex with Tp-1 Homolog, Compound 14
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Bromine with other atoms in the Br binding
site number 3 of The Structure of Ligand Binding Domain of Lasr in Complex with Tp-1 Homolog, Compound 14 within 5.0Å range:
|
Bromine binding site 4 out of 8 in 6d6l
Go back to
Bromine Binding Sites List in 6d6l
Bromine binding site 4 out
of 8 in the The Structure of Ligand Binding Domain of Lasr in Complex with Tp-1 Homolog, Compound 14
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Bromine with other atoms in the Br binding
site number 4 of The Structure of Ligand Binding Domain of Lasr in Complex with Tp-1 Homolog, Compound 14 within 5.0Å range:
|
Bromine binding site 5 out of 8 in 6d6l
Go back to
Bromine Binding Sites List in 6d6l
Bromine binding site 5 out
of 8 in the The Structure of Ligand Binding Domain of Lasr in Complex with Tp-1 Homolog, Compound 14
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Bromine with other atoms in the Br binding
site number 5 of The Structure of Ligand Binding Domain of Lasr in Complex with Tp-1 Homolog, Compound 14 within 5.0Å range:
|
Bromine binding site 6 out of 8 in 6d6l
Go back to
Bromine Binding Sites List in 6d6l
Bromine binding site 6 out
of 8 in the The Structure of Ligand Binding Domain of Lasr in Complex with Tp-1 Homolog, Compound 14
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Bromine with other atoms in the Br binding
site number 6 of The Structure of Ligand Binding Domain of Lasr in Complex with Tp-1 Homolog, Compound 14 within 5.0Å range:
|
Bromine binding site 7 out of 8 in 6d6l
Go back to
Bromine Binding Sites List in 6d6l
Bromine binding site 7 out
of 8 in the The Structure of Ligand Binding Domain of Lasr in Complex with Tp-1 Homolog, Compound 14
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Bromine with other atoms in the Br binding
site number 7 of The Structure of Ligand Binding Domain of Lasr in Complex with Tp-1 Homolog, Compound 14 within 5.0Å range:
|
Bromine binding site 8 out of 8 in 6d6l
Go back to
Bromine Binding Sites List in 6d6l
Bromine binding site 8 out
of 8 in the The Structure of Ligand Binding Domain of Lasr in Complex with Tp-1 Homolog, Compound 14
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Bromine with other atoms in the Br binding
site number 8 of The Structure of Ligand Binding Domain of Lasr in Complex with Tp-1 Homolog, Compound 14 within 5.0Å range:
|
Reference:
M.C.O'reilly,
S.H.Dong,
F.M.Rossi,
K.M.Karlen,
R.S.Kumar,
S.K.Nair,
H.E.Blackwell.
Structural and Biochemical Studies of Non-Native Agonists of the Lasr Quorum-Sensing Receptor Reveal An L3 Loop "Out" Conformation For Lasr. Cell Chem Biol V. 25 1128 2018.
ISSN: ESSN 2451-9448
PubMed: 30033130
DOI: 10.1016/J.CHEMBIOL.2018.06.007
Page generated: Thu Jul 11 01:37:15 2024
ISSN: ESSN 2451-9448
PubMed: 30033130
DOI: 10.1016/J.CHEMBIOL.2018.06.007
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