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Bromine in PDB 6e3t: Crystal Structure of the Heterodimeric Hif-2 Complex with Antagonist T1001

Protein crystallography data

The structure of Crystal Structure of the Heterodimeric Hif-2 Complex with Antagonist T1001, PDB code: 6e3t was solved by D.Wu, X.Su, J.Lu, S.Li, B.Hood, S.Vasile, N.Potluri, X.Diao, Y.Kim, S.Khorasanizadeh, F.Rastinejad, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 41.79 / 3.00
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 49.032, 97.981, 77.427, 90.00, 107.10, 90.00
R / Rfree (%) 24.6 / 30.6

Bromine Binding Sites:

The binding sites of Bromine atom in the Crystal Structure of the Heterodimeric Hif-2 Complex with Antagonist T1001 (pdb code 6e3t). This binding sites where shown within 5.0 Angstroms radius around Bromine atom.
In total only one binding site of Bromine was determined in the Crystal Structure of the Heterodimeric Hif-2 Complex with Antagonist T1001, PDB code: 6e3t:

Bromine binding site 1 out of 1 in 6e3t

Go back to Bromine Binding Sites List in 6e3t
Bromine binding site 1 out of 1 in the Crystal Structure of the Heterodimeric Hif-2 Complex with Antagonist T1001


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 1 of Crystal Structure of the Heterodimeric Hif-2 Complex with Antagonist T1001 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Br401

b:0.8
occ:1.00
BR1 B:HO7401 0.0 0.8 1.0
C12 B:HO7401 1.9 0.9 1.0
C13 B:HO7401 2.8 0.7 1.0
C11 B:HO7401 2.9 0.2 1.0
CG1 B:VAL302 3.3 75.2 1.0
CB B:SER292 3.9 82.2 1.0
OG1 B:THR321 4.0 0.0 1.0
C14 B:HO7401 4.1 0.4 1.0
C10 B:HO7401 4.2 0.4 1.0
CB B:SER304 4.2 90.1 1.0
CD2 B:LEU296 4.3 84.7 1.0
O B:SER292 4.4 91.4 1.0
C B:SER292 4.5 82.0 1.0
N B:SER304 4.5 68.7 1.0
O B:THR321 4.6 88.3 1.0
CB B:VAL302 4.6 75.5 1.0
C09 B:HO7401 4.7 0.4 1.0
CA B:SER304 4.7 75.8 1.0
OG B:SER292 4.8 0.9 1.0
CA B:SER292 4.8 64.5 1.0
N B:GLY323 4.8 76.1 1.0
CA B:GLY323 4.8 84.3 1.0
CG2 B:VAL302 4.8 63.9 1.0
OG B:SER304 4.9 77.0 1.0
N B:HIS293 4.9 92.9 1.0

Reference:

D.Wu, X.Su, J.Lu, S.Li, B.L.Hood, S.Vasile, N.Potluri, X.Diao, Y.Kim, S.Khorasanizadeh, F.Rastinejad. Bidirectional Modulation of Hif-2 Activity Through Chemical Ligands. Nat. Chem. Biol. V. 15 367 2019.
ISSN: ESSN 1552-4469
PubMed: 30804532
DOI: 10.1038/S41589-019-0234-5
Page generated: Mon Jul 7 09:47:02 2025

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