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Bromine in PDB 6gn1: Crystal Structure of Glycogen Synthase Kinase-3 Beta (GSK3B) in Complex with Pik-75

Enzymatic activity of Crystal Structure of Glycogen Synthase Kinase-3 Beta (GSK3B) in Complex with Pik-75

All present enzymatic activity of Crystal Structure of Glycogen Synthase Kinase-3 Beta (GSK3B) in Complex with Pik-75:
2.7.11.1; 2.7.11.26;

Protein crystallography data

The structure of Crystal Structure of Glycogen Synthase Kinase-3 Beta (GSK3B) in Complex with Pik-75, PDB code: 6gn1 was solved by R.Tesch, C.Becker, M.P.Mueller, C.M.R.Sant'anna, C.A.M.Fraga, D.Rauh, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 44.30 / 2.60
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 67.630, 119.500, 67.480, 90.00, 102.49, 90.00
R / Rfree (%) 22.2 / 25.9

Other elements in 6gn1:

The structure of Crystal Structure of Glycogen Synthase Kinase-3 Beta (GSK3B) in Complex with Pik-75 also contains other interesting chemical elements:

Chlorine (Cl) 2 atoms

Bromine Binding Sites:

The binding sites of Bromine atom in the Crystal Structure of Glycogen Synthase Kinase-3 Beta (GSK3B) in Complex with Pik-75 (pdb code 6gn1). This binding sites where shown within 5.0 Angstroms radius around Bromine atom.
In total 2 binding sites of Bromine where determined in the Crystal Structure of Glycogen Synthase Kinase-3 Beta (GSK3B) in Complex with Pik-75, PDB code: 6gn1:
Jump to Bromine binding site number: 1; 2;

Bromine binding site 1 out of 2 in 6gn1

Go back to Bromine Binding Sites List in 6gn1
Bromine binding site 1 out of 2 in the Crystal Structure of Glycogen Synthase Kinase-3 Beta (GSK3B) in Complex with Pik-75


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 1 of Crystal Structure of Glycogen Synthase Kinase-3 Beta (GSK3B) in Complex with Pik-75 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Br502

b:62.0
occ:1.00
BR2 B:F4N502 0.0 62.0 1.0
C24 B:F4N502 1.9 62.3 1.0
C25 B:F4N502 2.8 60.0 1.0
C23 B:F4N502 2.9 57.5 1.0
N8 B:F4N502 3.3 59.4 1.0
O22 B:F4N502 3.5 63.9 1.0
C4 B:F4N502 3.6 51.1 1.0
O21 B:F4N502 3.7 64.1 1.0
CD1 B:LEU132 4.0 41.9 1.0
CD B:LYS85 4.0 47.5 1.0
C3 B:F4N502 4.1 49.4 1.0
C26 B:F4N502 4.1 59.9 1.0
N18 B:F4N502 4.1 58.4 1.0
C5 B:F4N502 4.2 48.2 1.0
CB B:CYS199 4.4 49.5 1.0
O B:HOH609 4.4 64.0 1.0
SG B:CYS199 4.5 55.4 1.0
N B:ASP200 4.5 46.3 1.0
C19 B:F4N502 4.6 58.2 1.0
CB B:LYS85 4.7 45.9 1.0
NZ B:LYS85 4.7 57.4 1.0
CE B:LYS85 4.9 55.0 1.0
CG B:LYS85 4.9 46.1 1.0
CA B:ASP200 4.9 44.1 1.0
C2 B:F4N502 5.0 49.9 1.0

Bromine binding site 2 out of 2 in 6gn1

Go back to Bromine Binding Sites List in 6gn1
Bromine binding site 2 out of 2 in the Crystal Structure of Glycogen Synthase Kinase-3 Beta (GSK3B) in Complex with Pik-75


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 2 of Crystal Structure of Glycogen Synthase Kinase-3 Beta (GSK3B) in Complex with Pik-75 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br502

b:64.3
occ:1.00
BR2 A:F4N502 0.0 64.3 1.0
C24 A:F4N502 1.9 62.0 1.0
C25 A:F4N502 2.9 57.2 1.0
C23 A:F4N502 2.9 57.9 1.0
N8 A:F4N502 3.3 45.5 1.0
O22 A:F4N502 3.5 50.5 1.0
C4 A:F4N502 3.6 38.6 1.0
O21 A:F4N502 3.8 50.1 1.0
C3 A:F4N502 4.0 38.2 1.0
CD A:LYS85 4.0 39.8 1.0
CD1 A:LEU132 4.1 39.1 1.0
C5 A:F4N502 4.1 41.3 1.0
N18 A:F4N502 4.2 60.7 1.0
C26 A:F4N502 4.2 59.1 1.0
CB A:CYS199 4.3 42.6 1.0
SG A:CYS199 4.4 48.7 1.0
N A:ASP200 4.5 42.2 1.0
C19 A:F4N502 4.7 61.2 1.0
NZ A:LYS85 4.7 57.1 1.0
CB A:LYS85 4.8 40.4 1.0
C2 A:F4N502 4.8 40.6 1.0
CE A:LYS85 4.9 53.1 1.0
CA A:ASP200 4.9 39.5 1.0
CG A:LYS85 4.9 41.2 1.0
C6 A:F4N502 5.0 43.5 1.0

Reference:

R.Tesch, C.Becker, M.P.Muller, M.E.Beck, L.Quambusch, M.Getlik, J.Lategahn, N.Uhlenbrock, F.N.Costa, M.D.Poleto, P.S.M.Pinheiro, D.A.Rodrigues, C.M.R.Sant'anna, F.F.Ferreira, H.Verli, C.A.M.Fraga, D.Rauh. An Unusual Intramolecular Halogen Bond Guides Conformational Selection. Angew. Chem. Int. Ed. Engl. V. 57 9970 2018.
ISSN: ESSN 1521-3773
PubMed: 29873877
DOI: 10.1002/ANIE.201804917
Page generated: Thu Jul 11 01:59:38 2024

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