Bromine in PDB 6jl0: Crystal Structure of Vvplpa From Vibrio Vulnificus

The structure of Crystal Structure of Vvplpa From Vibrio Vulnificus, PDB code: 6jl0 was solved by Q.Ma, Y.Wan, C.Liu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	45.74 / 2.07
Space group	P 31 2 1
Cell size a, b, c (Å), α, β, γ (°)	53.865, 53.865, 232.287, 90.00, 90.00, 120.00
R / Rfree (%)	19.1 / 22.7

The binding sites of Bromine atom in the Crystal Structure of Vvplpa From Vibrio Vulnificus (pdb code 6jl0). This binding sites where shown within 5.0 Angstroms radius around Bromine atom.
In total only one binding site of Bromine was determined in the Crystal Structure of Vvplpa From Vibrio Vulnificus, PDB code: 6jl0:

Bromine binding site 1 out of 1 in the Crystal Structure of Vvplpa From Vibrio Vulnificus


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 1 of Crystal Structure of Vvplpa From Vibrio Vulnificus within 5.0Å range: probe atom residue distance (Å) B Occ A:Br501 b:39.9 occ:1.00 O A:HOH655 3.3 44.5 1.0 ND1 A:HIS392 3.3 39.8 1.0 N A:GLY389 3.4 41.5 1.0 CA A:GLY389 3.4 42.6 1.0 N A:HIS392 3.4 38.6 1.0 NE1 A:TRP173 3.4 38.4 1.0 CB A:HIS392 3.7 37.7 1.0 N A:THR391 3.9 43.6 1.0 C A:GLY389 3.9 42.3 1.0 CG A:HIS392 4.0 38.2 1.0 OH A:TYR367 4.0 42.4 1.0 N A:VAL390 4.0 40.5 1.0 CA A:HIS392 4.1 37.4 1.0 CE1 A:TYR367 4.1 44.2 1.0 CE2 A:TRP173 4.2 39.1 1.0 CB A:THR391 4.2 43.5 1.0 C A:THR391 4.4 41.3 1.0 CA A:THR391 4.4 42.6 1.0 CZ2 A:TRP173 4.4 40.8 1.0 CD1 A:TRP173 4.4 37.3 1.0 CE1 A:HIS392 4.5 40.3 1.0 O A:HIS392 4.5 38.0 1.0 CD1 A:TRP388 4.5 36.4 1.0 CZ A:TYR367 4.5 44.1 1.0 O A:GLY389 4.6 41.5 1.0 C A:TRP388 4.6 36.8 1.0 C A:HIS392 4.7 37.2 1.0 CB A:TRP388 4.8 34.8 1.0 C A:VAL390 5.0 39.3 1.0

Y.Wan, C.Liu, Q.Ma. Structural Analysis of Avibriophospholipase Reveals An Unusual Ser-His-Chloride Catalytic Triad. J.Biol.Chem. V. 294 11391 2019.
ISSN: ESSN 1083-351X
PubMed: 31073025
DOI: 10.1074/JBC.RA119.008280