Bromine in PDB 6k6j: The Crystal Structure of Light-Driven Cyanobacterial Chloride Importer From Mastigocladopsis Repens with Bromide Ion

Protein crystallography data

The structure of The Crystal Structure of Light-Driven Cyanobacterial Chloride Importer From Mastigocladopsis Repens with Bromide Ion, PDB code: 6k6j was solved by J.H.Yun, J.H.Park, Z.Jin, M.Ohki, Y.Wang, C.S.Lupala, M.Kim, H.Liu, S.Y.Park, W.Lee, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.80 / 2.50
Space group P 63 2 2
Cell size a, b, c (Å), α, β, γ (°) 61.618, 61.618, 240.176, 90.00, 90.00, 120.00
R / Rfree (%) 19.4 / 26.7

Bromine Binding Sites:

The binding sites of Bromine atom in the The Crystal Structure of Light-Driven Cyanobacterial Chloride Importer From Mastigocladopsis Repens with Bromide Ion (pdb code 6k6j). This binding sites where shown within 5.0 Angstroms radius around Bromine atom.
In total 2 binding sites of Bromine where determined in the The Crystal Structure of Light-Driven Cyanobacterial Chloride Importer From Mastigocladopsis Repens with Bromide Ion, PDB code: 6k6j:
Jump to Bromine binding site number: 1; 2;

Bromine binding site 1 out of 2 in 6k6j

Go back to Bromine Binding Sites List in 6k6j
Bromine binding site 1 out of 2 in the The Crystal Structure of Light-Driven Cyanobacterial Chloride Importer From Mastigocladopsis Repens with Bromide Ion


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 1 of The Crystal Structure of Light-Driven Cyanobacterial Chloride Importer From Mastigocladopsis Repens with Bromide Ion within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br316

b:37.1
occ:1.00
OG A:SER78 3.0 24.3 1.0
OG1 A:THR74 3.3 32.6 1.0
CE A:LYS204 3.5 20.0 1.0
O A:THR74 3.6 26.2 1.0
CB A:THR74 3.6 34.3 1.0
C A:THR74 3.6 26.7 1.0
CD1 A:TRP75 3.7 29.1 1.0
CD2 A:LEU49 3.7 9.9 1.0
N A:TRP75 3.8 24.5 1.0
NZ A:LYS204 3.9 19.6 1.0
CB A:SER78 3.9 20.0 1.0
CA A:ALA46 4.0 9.7 1.0
CG2 A:ILE45 4.1 11.2 1.0
CA A:TRP75 4.1 24.8 1.0
N A:ALA46 4.2 10.1 1.0
CA A:THR74 4.3 22.7 1.0
CB A:ALA46 4.3 9.6 1.0
CB A:LEU49 4.4 11.2 1.0
C A:ILE45 4.5 15.7 1.0
NE1 A:TRP75 4.5 28.2 1.0
O A:ILE45 4.5 16.9 1.0
CG A:LEU49 4.7 13.9 1.0
CG A:TRP75 4.7 26.0 1.0
CD A:LYS204 4.9 22.8 1.0
C15 A:RET301 4.9 17.0 1.0
CG2 A:THR74 4.9 34.9 1.0
CB A:ILE45 5.0 13.6 1.0

Bromine binding site 2 out of 2 in 6k6j

Go back to Bromine Binding Sites List in 6k6j
Bromine binding site 2 out of 2 in the The Crystal Structure of Light-Driven Cyanobacterial Chloride Importer From Mastigocladopsis Repens with Bromide Ion


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 2 of The Crystal Structure of Light-Driven Cyanobacterial Chloride Importer From Mastigocladopsis Repens with Bromide Ion within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br317

b:83.4
occ:1.00
N A:ARG154 3.5 39.0 1.0
OG A:SER155 3.6 49.1 1.0
CA A:HIS152 3.6 40.3 1.0
C A:HIS152 3.7 44.4 1.0
N A:SER155 3.7 34.8 1.0
CB A:HIS152 3.7 41.2 1.0
CB A:ARG154 3.8 38.2 1.0
CA A:ARG154 3.9 38.0 1.0
N A:PRO153 3.9 41.7 1.0
C A:ARG154 4.0 40.1 1.0
CB A:SER155 4.0 38.1 1.0
O A:HIS152 4.1 44.2 1.0
CD A:PRO153 4.2 43.5 1.0
CA A:SER155 4.5 34.1 1.0
ND1 A:HIS152 4.5 46.3 1.0
CG A:ARG154 4.5 52.9 1.0
C A:PRO153 4.5 43.8 1.0
CG A:HIS152 4.6 44.4 1.0
CA A:PRO153 4.8 41.4 1.0
O A:ARG154 4.8 40.3 1.0

Reference:

J.H.Yun, J.H.Park, Z.Jin, M.Ohki, Y.Wang, C.S.Lupala, M.Kim, H.Liu, S.Y.Park, W.Lee. The Crystal Structure of Light-Driven Cyanobacterial Chloride Importer From Mastigocladopsis Repens with Bromide Ion To Be Published.
Page generated: Sat Dec 12 02:34:26 2020

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