Bromine in PDB 6lwy: Crystal Structure of LATEROSPORULIN3, Bacteriocin Produced By Brevibacillus Sp. Strain SKR3

Protein crystallography data

The structure of Crystal Structure of LATEROSPORULIN3, Bacteriocin Produced By Brevibacillus Sp. Strain SKR3, PDB code: 6lwy was solved by K.G.Thakur, V.Solanki, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 36.64 / 2.30
Space group P 43 3 2
Cell size a, b, c (Å), α, β, γ (°) 63.46, 63.46, 63.46, 90, 90, 90
R / Rfree (%) 18.7 / 23.3

Bromine Binding Sites:

The binding sites of Bromine atom in the Crystal Structure of LATEROSPORULIN3, Bacteriocin Produced By Brevibacillus Sp. Strain SKR3 (pdb code 6lwy). This binding sites where shown within 5.0 Angstroms radius around Bromine atom.
In total 4 binding sites of Bromine where determined in the Crystal Structure of LATEROSPORULIN3, Bacteriocin Produced By Brevibacillus Sp. Strain SKR3, PDB code: 6lwy:
Jump to Bromine binding site number: 1; 2; 3; 4;

Bromine binding site 1 out of 4 in 6lwy

Go back to Bromine Binding Sites List in 6lwy
Bromine binding site 1 out of 4 in the Crystal Structure of LATEROSPORULIN3, Bacteriocin Produced By Brevibacillus Sp. Strain SKR3


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 1 of Crystal Structure of LATEROSPORULIN3, Bacteriocin Produced By Brevibacillus Sp. Strain SKR3 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br101

b:36.1
occ:1.00
N A:ASP7 3.4 30.4 1.0
N A:MET35 3.5 30.4 1.0
N A:ASN36 3.5 35.8 1.0
O A:ALA8 3.6 21.6 1.0
N A:ALA8 3.7 27.0 1.0
CB A:CYS34 3.7 21.0 1.0
CB A:ASP7 3.8 39.1 1.0
CB A:MET35 3.8 38.7 1.0
CG A:ASN36 3.8 41.8 1.0
CD A:PRO6 3.9 27.4 1.0
CB A:CYS5 3.9 24.4 1.0
OD1 A:ASN36 4.0 43.0 1.0
CA A:ASP7 4.0 33.5 1.0
CB A:ASN36 4.0 39.2 1.0
CA A:MET35 4.0 35.4 1.0
N A:PRO6 4.1 28.6 1.0
ND2 A:ASN36 4.1 42.5 1.0
CB A:PRO6 4.2 32.3 1.0
C A:MET35 4.3 35.9 1.0
C A:CYS34 4.3 21.5 1.0
OD2 A:ASP7 4.3 48.3 1.0
C A:ASP7 4.3 29.6 1.0
C A:PRO6 4.4 33.0 1.0
CA A:CYS34 4.4 21.4 1.0
CG A:PRO6 4.4 30.9 1.0
CA A:ASN36 4.4 37.8 1.0
CA A:PRO6 4.5 31.8 1.0
C A:ALA8 4.5 21.3 1.0
C A:CYS5 4.6 28.7 1.0
CG A:ASP7 4.6 46.1 1.0
SG A:CYS34 4.7 26.5 1.0
CG A:MET35 4.7 40.6 1.0
CA A:ALA8 4.7 26.9 1.0
CA A:CYS5 4.8 25.8 1.0
CE A:MET35 4.9 41.6 1.0

Bromine binding site 2 out of 4 in 6lwy

Go back to Bromine Binding Sites List in 6lwy
Bromine binding site 2 out of 4 in the Crystal Structure of LATEROSPORULIN3, Bacteriocin Produced By Brevibacillus Sp. Strain SKR3


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 2 of Crystal Structure of LATEROSPORULIN3, Bacteriocin Produced By Brevibacillus Sp. Strain SKR3 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br102

b:51.3
occ:1.00
CD2 A:HIS14 3.4 31.0 1.0
NE2 A:HIS14 3.6 31.3 1.0
N A:HIS14 3.6 23.6 1.0
OG1 A:THR13 3.7 29.9 1.0
O A:HIS14 3.8 25.8 1.0
CG A:HIS14 4.0 30.1 1.0
CA A:THR13 4.1 24.8 1.0
CE1 A:HIS14 4.2 30.9 1.0
C A:THR13 4.4 26.3 1.0
ND1 A:HIS14 4.4 30.5 1.0
CB A:THR13 4.4 26.6 1.0
CA A:HIS14 4.5 25.5 1.0
C A:HIS14 4.6 25.8 1.0
CB A:HIS14 4.8 27.8 1.0

Bromine binding site 3 out of 4 in 6lwy

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Bromine binding site 3 out of 4 in the Crystal Structure of LATEROSPORULIN3, Bacteriocin Produced By Brevibacillus Sp. Strain SKR3


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 3 of Crystal Structure of LATEROSPORULIN3, Bacteriocin Produced By Brevibacillus Sp. Strain SKR3 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br103

b:25.5
occ:0.50
N A:TYR17 3.5 34.0 1.0
CD2 A:TYR17 3.5 40.6 1.0
NH1 A:ARG28 3.6 38.5 1.0
CB A:TYR17 4.0 36.9 1.0
CG A:TYR17 4.1 37.9 1.0
CE1 A:HIS14 4.2 30.9 1.0
CA A:ASP16 4.2 25.6 1.0
C A:ASP16 4.3 33.6 1.0
CA A:TYR17 4.3 34.9 1.0
CE2 A:TYR17 4.4 42.9 1.0
CD A:ARG28 4.6 29.5 1.0
O A:THR15 4.7 25.9 1.0
ND1 A:HIS14 4.7 30.5 1.0
OD1 A:ASP16 4.8 27.8 1.0
CZ A:ARG28 4.8 37.6 1.0
CB A:ASP16 4.9 27.7 1.0

Bromine binding site 4 out of 4 in 6lwy

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Bromine binding site 4 out of 4 in the Crystal Structure of LATEROSPORULIN3, Bacteriocin Produced By Brevibacillus Sp. Strain SKR3


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 4 of Crystal Structure of LATEROSPORULIN3, Bacteriocin Produced By Brevibacillus Sp. Strain SKR3 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br104

b:80.9
occ:1.00
N A:ALA2 3.4 25.8 1.0
CD A:ARG43 3.6 39.7 1.0
CB A:ARG43 3.8 33.1 1.0
O A:CYS42 4.2 33.7 1.0
CG A:ARG43 4.3 34.6 1.0
NH1 A:ARG43 4.4 56.6 1.0
C A:CYS42 4.6 31.5 1.0
CA A:ALA2 4.7 25.6 1.0
NE A:ARG43 4.8 46.5 1.0
CB A:CYS42 4.8 30.2 1.0
N A:ARG43 4.9 30.3 1.0
CA A:ARG43 4.9 30.0 1.0

Reference:

K.G.Thakur, V.Solanki. Crystal Structure of LATEROSPORULIN3, Bacteriocin Produced By Brevibacillus Sp. Strain SKR3 To Be Published.
Page generated: Sat Apr 17 13:29:46 2021

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