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Bromine in PDB 6mwl: Lasr Lbd:Mbtl Complex

Protein crystallography data

The structure of Lasr Lbd:Mbtl Complex, PDB code: 6mwl was solved by B.L.Bassler, J.E.Paczkowski, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.20 / 1.50
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 52.073, 67.325, 53.785, 90.00, 117.07, 90.00
R / Rfree (%) 19.1 / 22.2

Bromine Binding Sites:

The binding sites of Bromine atom in the Lasr Lbd:Mbtl Complex (pdb code 6mwl). This binding sites where shown within 5.0 Angstroms radius around Bromine atom.
In total 2 binding sites of Bromine where determined in the Lasr Lbd:Mbtl Complex, PDB code: 6mwl:
Jump to Bromine binding site number: 1; 2;

Bromine binding site 1 out of 2 in 6mwl

Go back to Bromine Binding Sites List in 6mwl
Bromine binding site 1 out of 2 in the Lasr Lbd:Mbtl Complex


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 1 of Lasr Lbd:Mbtl Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br301

b:21.3
occ:1.00
BR1 A:K5G301 0.0 21.3 1.0
C02 A:K5G301 1.9 16.3 1.0
C03 A:K5G301 2.9 15.3 1.0
C20 A:K5G301 2.9 19.0 1.0
N A:LEU33 3.7 12.9 1.0
C A:GLY32 3.7 11.4 1.0
CA A:GLY32 3.9 11.0 1.0
CD1 A:ILE46 4.0 21.4 1.0
CG A:LEU34 4.0 18.8 1.0
CE1 A:TYR41 4.0 25.6 1.0
CB A:ALA44 4.1 21.6 1.0
O A:GLY32 4.1 12.5 1.0
C A:LEU33 4.1 15.7 1.0
C04 A:K5G301 4.1 14.2 1.0
CD1 A:TYR41 4.2 25.2 1.0
C19 A:K5G301 4.2 19.0 1.0
CA A:LEU33 4.2 13.8 1.0
CD1 A:LEU34 4.3 21.3 1.0
O A:LEU33 4.4 17.1 1.0
N A:LEU34 4.4 12.4 1.0
O A:LEU119 4.6 12.2 1.0
C18 A:K5G301 4.7 15.8 1.0
CD2 A:LEU34 4.7 22.0 1.0
CA A:GLY120 4.8 12.5 1.0
CB A:LEU34 4.9 15.4 1.0

Bromine binding site 2 out of 2 in 6mwl

Go back to Bromine Binding Sites List in 6mwl
Bromine binding site 2 out of 2 in the Lasr Lbd:Mbtl Complex


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 2 of Lasr Lbd:Mbtl Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Br301

b:23.6
occ:1.00
BR1 B:K5G301 0.0 23.6 1.0
C02 B:K5G301 1.9 16.1 1.0
C03 B:K5G301 2.8 16.5 1.0
C20 B:K5G301 2.9 16.2 1.0
N B:LEU33 3.6 13.8 1.0
C B:GLY32 3.7 14.7 1.0
CG B:LEU34 3.8 25.4 1.0
CA B:GLY32 3.9 12.8 1.0
O B:GLY32 4.1 12.9 1.0
CD1 B:LEU34 4.1 28.2 1.0
C04 B:K5G301 4.1 14.8 1.0
CA B:LEU33 4.2 14.8 1.0
C B:LEU33 4.2 18.0 1.0
C19 B:K5G301 4.2 18.2 1.0
CD1 B:ILE46 4.2 25.8 1.0
CB B:ALA44 4.3 31.1 1.0
O B:LEU119 4.3 15.0 1.0
N B:LEU34 4.4 16.1 1.0
CD2 B:LEU34 4.5 32.7 1.0
CA B:GLY120 4.5 13.3 1.0
O B:LEU33 4.6 18.2 1.0
C18 B:K5G301 4.7 15.3 1.0
CB B:LEU34 4.8 20.2 1.0

Reference:

J.E.Paczkowski, A.R.Mccready, J.P.Cong, Z.Li, P.D.Jeffrey, C.D.Smith, B.R.Henke, F.M.Hughson, B.L.Bassler. An Autoinducer Analogue Reveals An Alternative Mode of Ligand Binding For the Lasr Quorum-Sensing Receptor. Acs Chem.Biol. V. 14 378 2019.
ISSN: ESSN 1554-8937
PubMed: 30763066
DOI: 10.1021/ACSCHEMBIO.8B00971
Page generated: Thu Jul 11 02:18:29 2024

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