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Bromine in PDB 6ror: Rep Related 18-Mer Dna

Protein crystallography data

The structure of Rep Related 18-Mer Dna, PDB code: 6ror was solved by P.Kolenko, J.Svoboda, B.Schneider, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 35.42 / 2.60
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 38.473, 38.473, 90.783, 90.00, 90.00, 90.00
R / Rfree (%) 23.1 / 30.3

Other elements in 6ror:

The structure of Rep Related 18-Mer Dna also contains other interesting chemical elements:

Strontium (Sr) 2 atoms

Bromine Binding Sites:

The binding sites of Bromine atom in the Rep Related 18-Mer Dna (pdb code 6ror). This binding sites where shown within 5.0 Angstroms radius around Bromine atom.
In total only one binding site of Bromine was determined in the Rep Related 18-Mer Dna, PDB code: 6ror:

Bromine binding site 1 out of 1 in 6ror

Go back to Bromine Binding Sites List in 6ror
Bromine binding site 1 out of 1 in the Rep Related 18-Mer Dna


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 1 of Rep Related 18-Mer Dna within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br9

b:0.1
occ:1.00
BR A:BRU9 0.0 0.1 1.0
C5 A:BRU9 1.9 0.5 1.0
C6 A:BRU9 2.8 0.7 1.0
C4 A:BRU9 2.9 0.4 1.0
O4 A:BRU9 3.1 0.6 1.0
C6 A:DC8 3.3 0.4 1.0
C5 A:DC8 3.5 0.8 1.0
O5' A:DC8 3.7 0.8 1.0
OP2 A:BRU9 3.9 0.3 1.0
C3' A:DC8 4.1 0.9 1.0
N1 A:BRU9 4.1 0.1 1.0
N3 A:BRU9 4.2 0.4 1.0
N1 A:DC8 4.2 0.2 1.0
OP2 A:DC8 4.2 1.0 1.0
C4 A:DC8 4.4 0.5 1.0
O5' A:BRU9 4.6 0.7 1.0
C2 A:BRU9 4.6 0.7 1.0
P A:DC8 4.6 1.0 1.0
C2' A:DC8 4.7 0.1 1.0
O4' A:DC8 4.7 0.5 1.0
C5' A:DC8 4.7 0.1 1.0
P A:BRU9 4.7 0.9 1.0
C4' A:DC8 4.7 0.3 1.0
C1' A:DC8 4.7 1.0 1.0
C7 A:DT10 4.8 0.8 1.0
O3' A:DC8 4.9 0.7 1.0
C2 A:DC8 5.0 1.0 1.0

Reference:

P.Kolenko, J.Svoboda, B.Schneider. Rep Related 18-Mer Dna To Be Published.
Page generated: Thu Jul 11 02:35:49 2024

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