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Bromine in PDB 6u8o: Discovery and Optimization of Salicyclic Acid-Derived Sulfonamide Inhibitors of the WDR5:Myc Protein-Protein Interaction

Protein crystallography data

The structure of Discovery and Optimization of Salicyclic Acid-Derived Sulfonamide Inhibitors of the WDR5:Myc Protein-Protein Interaction, PDB code: 6u8o was solved by B.Zhao, F.Wang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 28.83 / 1.60
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 57.831, 50.200, 62.409, 90.00, 112.97, 90.00
R / Rfree (%) 14.6 / 18.4

Bromine Binding Sites:

The binding sites of Bromine atom in the Discovery and Optimization of Salicyclic Acid-Derived Sulfonamide Inhibitors of the WDR5:Myc Protein-Protein Interaction (pdb code 6u8o). This binding sites where shown within 5.0 Angstroms radius around Bromine atom.
In total only one binding site of Bromine was determined in the Discovery and Optimization of Salicyclic Acid-Derived Sulfonamide Inhibitors of the WDR5:Myc Protein-Protein Interaction, PDB code: 6u8o:

Bromine binding site 1 out of 1 in 6u8o

Go back to Bromine Binding Sites List in 6u8o
Bromine binding site 1 out of 1 in the Discovery and Optimization of Salicyclic Acid-Derived Sulfonamide Inhibitors of the WDR5:Myc Protein-Protein Interaction


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 1 of Discovery and Optimization of Salicyclic Acid-Derived Sulfonamide Inhibitors of the WDR5:Myc Protein-Protein Interaction within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br401

b:23.7
occ:1.00
BR9 A:Q1G401 0.0 23.7 1.0
C08 A:Q1G401 1.9 22.7 1.0
C10 A:Q1G401 2.8 24.4 1.0
C07 A:Q1G401 2.9 22.5 1.0
O A:TRP273 3.2 18.1 1.0
O A:SER267 3.6 19.5 1.0
N A:TRP273 3.7 15.6 1.0
CB A:PHE266 3.8 14.6 1.0
C A:LYS272 3.8 18.4 1.0
CD2 A:PHE266 3.8 18.6 1.0
CA A:LYS272 3.9 16.4 1.0
N A:SER267 3.9 14.7 1.0
CB A:LYS272 4.0 20.0 1.0
C A:TRP273 4.0 16.0 1.0
CA A:PHE266 4.1 15.0 1.0
CD2 A:LEU288 4.2 17.1 1.0
C11 A:Q1G401 4.2 25.6 1.0
C06 A:Q1G401 4.2 24.6 1.0
CD1 A:LEU288 4.2 18.4 1.0
CB A:LEU288 4.3 19.1 1.0
CG A:PHE266 4.3 15.2 1.0
C A:PHE266 4.4 16.4 1.0
C A:SER267 4.4 17.1 1.0
CG A:LEU288 4.4 18.0 1.0
CA A:TRP273 4.4 14.4 1.0
O A:LYS272 4.5 21.1 1.0
CD1 A:ILE274 4.6 17.5 1.0
CG A:LYS272 4.7 22.2 1.0
C12 A:Q1G401 4.7 27.6 1.0
CA A:SER267 4.8 16.1 1.0
N A:ILE274 4.9 16.5 1.0
CE2 A:PHE266 5.0 18.9 1.0
O A:HOH637 5.0 19.1 1.0

Reference:

J.D.Macdonald, S.Chacon Simon, C.Han, F.Wang, J.G.Shaw, J.E.Howes, J.Sai, J.Yuh, D.V.Camper, B.M.Alicie, J.Alvarado, S.Nikhar, W.G.Payne, E.R.Aho, J.Bauer, B.Zhao, J.Phan, L.R.Thomas, O.W.Rossanese, W.P.Tansey, A.G.Waterson, S.R.Stauffer, S.W.Fesik. Discovery and Optimization of Salicylic Acid-Derived Sulfonamide Inhibitors of the Wd Repeat-Containing Protein 5 (WDR5)-Myc Protein-Protein Interaction. J.Med.Chem. 2019.
ISSN: ISSN 0022-2623
PubMed: 31724864
DOI: 10.1021/ACS.JMEDCHEM.9B01411
Page generated: Thu Jul 11 02:56:05 2024

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