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Bromine in PDB 6vht: Klebsiella Oxytoca Npsa N-Terminal Subdomain in Space Group C2

Protein crystallography data

The structure of Klebsiella Oxytoca Npsa N-Terminal Subdomain in Space Group C2, PDB code: 6vht was solved by D.F.Kreitler, A.M.Gulick, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 46.76 / 1.84
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 76.597, 60.088, 80.775, 90.00, 103.54, 90.00
R / Rfree (%) 20.8 / 24.8

Other elements in 6vht:

The structure of Klebsiella Oxytoca Npsa N-Terminal Subdomain in Space Group C2 also contains other interesting chemical elements:

Chlorine (Cl) 2 atoms

Bromine Binding Sites:

The binding sites of Bromine atom in the Klebsiella Oxytoca Npsa N-Terminal Subdomain in Space Group C2 (pdb code 6vht). This binding sites where shown within 5.0 Angstroms radius around Bromine atom.
In total only one binding site of Bromine was determined in the Klebsiella Oxytoca Npsa N-Terminal Subdomain in Space Group C2, PDB code: 6vht:

Bromine binding site 1 out of 1 in 6vht

Go back to Bromine Binding Sites List in 6vht
Bromine binding site 1 out of 1 in the Klebsiella Oxytoca Npsa N-Terminal Subdomain in Space Group C2


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 1 of Klebsiella Oxytoca Npsa N-Terminal Subdomain in Space Group C2 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br501

b:43.0
occ:0.50
NH1 A:ARG252 3.1 43.5 1.0
N A:ASN276 3.3 51.9 1.0
CA A:VAL275 3.8 47.6 1.0
CD A:ARG252 3.8 35.8 1.0
C A:VAL275 4.0 49.2 1.0
CG1 A:VAL275 4.0 46.0 1.0
CB A:ASN276 4.2 57.5 1.0
CZ A:ARG252 4.2 42.6 1.0
CD1 A:LEU279 4.3 63.0 1.0
CA A:ASN276 4.4 55.0 1.0
CB A:VAL275 4.4 45.9 1.0
NE A:ARG252 4.5 41.5 1.0
O A:PHE274 4.5 57.0 1.0
CG2 A:VAL275 4.7 47.3 1.0
N A:VAL275 4.9 47.9 1.0

Reference:

E.M.Alexander, D.F.Kreitler, V.Guidolin, A.K.Hurben, E.J.Drake, P.W.Villalta, S.Balbo, A.M.Gulick, C.C.Aldrich. Biosynthesis, Mechanism of Action, and Inhibition of the Enterotoxin Tilimycin Produced By the Opportunistic Pathogen Klebsiella Oxytoca. Acs Infect Dis. 2020.
ISSN: ESSN 2373-8227
PubMed: 32485104
DOI: 10.1021/ACSINFECDIS.0C00326
Page generated: Thu Jul 11 03:02:00 2024

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