Bromine in PDB 6yid: Crystal Structure of ULK2 in Complex with Sbi-0206965

Enzymatic activity of Crystal Structure of ULK2 in Complex with Sbi-0206965

All present enzymatic activity of Crystal Structure of ULK2 in Complex with Sbi-0206965:
2.7.11.1;

Protein crystallography data

The structure of Crystal Structure of ULK2 in Complex with Sbi-0206965, PDB code: 6yid was solved by A.Chaikuad, H.Ren, N.A.Bakas, L.J.Lambert, N.D.P.Cosford, S.Knapp, Structural Genomics Consortium (Sgc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.55 / 2.70
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 75.968, 76.526, 95.244, 90.00, 97.03, 90.00
R / Rfree (%) 19.2 / 23.8

Bromine Binding Sites:

The binding sites of Bromine atom in the Crystal Structure of ULK2 in Complex with Sbi-0206965 (pdb code 6yid). This binding sites where shown within 5.0 Angstroms radius around Bromine atom.
In total 4 binding sites of Bromine where determined in the Crystal Structure of ULK2 in Complex with Sbi-0206965, PDB code: 6yid:
Jump to Bromine binding site number: 1; 2; 3; 4;

Bromine binding site 1 out of 4 in 6yid

Go back to Bromine Binding Sites List in 6yid
Bromine binding site 1 out of 4 in the Crystal Structure of ULK2 in Complex with Sbi-0206965


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 1 of Crystal Structure of ULK2 in Complex with Sbi-0206965 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Br301

b:66.2
occ:1.00
BR5 A:EDJ301 0.0 66.2 1.0
C5 A:EDJ301 1.9 57.1 1.0
C6 A:EDJ301 2.8 60.3 1.0
C4 A:EDJ301 2.9 55.2 1.0
OAU A:EDJ301 3.1 57.5 1.0
SD A:MET85 3.6 59.8 1.0
CB A:MET85 3.9 52.1 1.0
O A:GLU86 4.0 54.3 1.0
CB A:ALA37 4.0 52.5 1.0
OAE A:EDJ301 4.1 67.7 1.0
N1 A:EDJ301 4.1 59.1 1.0
CG2 A:VAL69 4.2 58.3 1.0
N3 A:EDJ301 4.2 57.6 1.0
CE A:MET85 4.2 65.0 1.0
CG A:MET85 4.4 55.9 1.0
CAZ A:EDJ301 4.5 61.2 1.0
C2 A:EDJ301 4.6 60.5 1.0
CD1 A:LEU138 4.6 59.1 1.0
CE A:LYS39 4.6 82.9 1.0
CAV A:EDJ301 4.8 64.6 1.0

Bromine binding site 2 out of 4 in 6yid

Go back to Bromine Binding Sites List in 6yid
Bromine binding site 2 out of 4 in the Crystal Structure of ULK2 in Complex with Sbi-0206965


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 2 of Crystal Structure of ULK2 in Complex with Sbi-0206965 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Br301

b:76.6
occ:1.00
BR5 B:EDJ301 0.0 76.6 1.0
C5 B:EDJ301 1.9 58.8 1.0
C6 B:EDJ301 2.8 54.5 1.0
C4 B:EDJ301 2.9 56.3 1.0
OAU B:EDJ301 3.1 50.9 1.0
CE B:LYS39 3.8 70.4 1.0
SD B:MET85 3.9 53.1 1.0
CB B:ALA37 4.0 48.2 1.0
CB B:MET85 4.1 52.3 1.0
N1 B:EDJ301 4.1 51.7 1.0
N3 B:EDJ301 4.1 53.4 1.0
O B:GLU86 4.3 53.3 1.0
OAE B:EDJ301 4.3 61.9 1.0
CE B:MET85 4.4 59.9 1.0
CG2 B:VAL69 4.4 61.6 1.0
CAZ B:EDJ301 4.4 51.0 1.0
NZ B:LYS39 4.5 79.1 1.0
C2 B:EDJ301 4.5 49.8 1.0
CG B:MET85 4.6 56.9 1.0
CD1 B:LEU138 4.7 57.1 1.0
CG B:LYS39 4.7 61.9 1.0
CD B:LYS39 4.8 65.6 1.0
CAV B:EDJ301 4.9 60.5 1.0
CG1 B:VAL23 4.9 48.9 1.0

Bromine binding site 3 out of 4 in 6yid

Go back to Bromine Binding Sites List in 6yid
Bromine binding site 3 out of 4 in the Crystal Structure of ULK2 in Complex with Sbi-0206965


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 3 of Crystal Structure of ULK2 in Complex with Sbi-0206965 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Br301

b:88.5
occ:1.00
BR5 C:EDJ301 0.0 88.5 1.0
C5 C:EDJ301 1.9 64.7 1.0
C6 C:EDJ301 2.8 63.5 1.0
C4 C:EDJ301 2.9 64.6 1.0
OAU C:EDJ301 3.0 69.5 1.0
SD C:MET85 3.9 80.7 1.0
CB C:ALA37 3.9 69.4 1.0
N1 C:EDJ301 4.1 59.9 1.0
CB C:MET85 4.1 70.4 1.0
N3 C:EDJ301 4.2 59.3 1.0
O C:GLU86 4.3 69.6 1.0
CE C:LYS39 4.3 97.9 1.0
CE C:MET85 4.3 83.2 1.0
CAZ C:EDJ301 4.4 72.1 1.0
CG2 C:VAL69 4.5 71.0 1.0
C2 C:EDJ301 4.6 59.3 1.0
CG C:MET85 4.6 77.6 1.0
CD1 C:LEU138 4.7 68.8 1.0
OAE C:EDJ301 4.8 83.0 1.0
NZ C:LYS39 4.8 0.0 1.0
CAV C:EDJ301 4.9 79.4 1.0
CG1 C:VAL23 4.9 71.6 1.0

Bromine binding site 4 out of 4 in 6yid

Go back to Bromine Binding Sites List in 6yid
Bromine binding site 4 out of 4 in the Crystal Structure of ULK2 in Complex with Sbi-0206965


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 4 of Crystal Structure of ULK2 in Complex with Sbi-0206965 within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Br301

b:84.1
occ:1.00
BR5 D:EDJ301 0.0 84.1 1.0
C5 D:EDJ301 1.9 68.9 1.0
C6 D:EDJ301 2.8 67.3 1.0
C4 D:EDJ301 2.9 69.0 1.0
OAU D:EDJ301 3.0 67.7 1.0
CB D:ALA37 3.8 66.2 1.0
SD D:MET85 4.0 67.2 1.0
N1 D:EDJ301 4.1 67.6 1.0
N3 D:EDJ301 4.1 67.1 1.0
CB D:MET85 4.1 59.1 1.0
CE D:LYS39 4.1 93.5 1.0
OAE D:EDJ301 4.2 84.6 1.0
O D:GLU86 4.3 67.0 1.0
CAZ D:EDJ301 4.4 68.3 1.0
CE D:MET85 4.5 68.7 1.0
C2 D:EDJ301 4.5 67.0 1.0
CG D:MET85 4.6 61.6 1.0
CG2 D:VAL69 4.7 61.9 1.0
CG1 D:VAL23 4.8 73.2 1.0
CAV D:EDJ301 4.8 76.1 1.0
CD1 D:LEU138 4.8 71.7 1.0
CG D:LYS39 4.8 80.6 1.0
NZ D:LYS39 4.9 99.3 1.0

Reference:

A.Chaikuad, H.Ren, N.A.Bakas, L.J.Lambert, N.D.P.Cosford, S.Knapp, Structural Genomics Consortium (Sgc). Crystal Structure of ULK2 in Complex with Sbi-0206965 To Be Published.
Page generated: Sat Dec 12 02:41:14 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy