Bromine in PDB 6z2s: Crystal Structure of Adhibin Analogue-Bound Myosin-2
Protein crystallography data
The structure of Crystal Structure of Adhibin Analogue-Bound Myosin-2, PDB code: 6z2s
was solved by
W.Ewert,
H.-J.Knoelker,
G.Tsiavaliaris,
M.Preller,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
45.47 /
3.20
|
Space group
|
C 2 2 21
|
Cell size a, b, c (Å), α, β, γ (°)
|
90.931,
144.22,
156.937,
90,
90,
90
|
R / Rfree (%)
|
21.8 /
26.2
|
Other elements in 6z2s:
The structure of Crystal Structure of Adhibin Analogue-Bound Myosin-2 also contains other interesting chemical elements:
Bromine Binding Sites:
The binding sites of Bromine atom in the Crystal Structure of Adhibin Analogue-Bound Myosin-2
(pdb code 6z2s). This binding sites where shown within
5.0 Angstroms radius around Bromine atom.
In total 2 binding sites of Bromine where determined in the
Crystal Structure of Adhibin Analogue-Bound Myosin-2, PDB code: 6z2s:
Jump to Bromine binding site number:
1;
2;
Bromine binding site 1 out
of 2 in 6z2s
Go back to
Bromine Binding Sites List in 6z2s
Bromine binding site 1 out
of 2 in the Crystal Structure of Adhibin Analogue-Bound Myosin-2
Mono view
Stereo pair view
|
A full contact list of Bromine with other atoms in the Br binding
site number 1 of Crystal Structure of Adhibin Analogue-Bound Myosin-2 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Br802
b:256.6
occ:0.87
|
BR2
|
A:Q5Q802
|
0.0
|
256.6
|
0.9
|
C11
|
A:Q5Q802
|
1.9
|
96.1
|
0.9
|
HB3
|
A:SER266
|
2.8
|
109.8
|
1.0
|
C10
|
A:Q5Q802
|
2.9
|
47.9
|
0.9
|
C13
|
A:Q5Q802
|
2.9
|
92.4
|
0.9
|
H101
|
A:Q5Q802
|
3.0
|
57.4
|
0.9
|
HG3
|
A:GLU264
|
3.3
|
79.4
|
1.0
|
BR1
|
A:Q5Q802
|
3.4
|
158.3
|
0.9
|
CB
|
A:SER266
|
3.6
|
91.5
|
1.0
|
OG
|
A:SER266
|
3.7
|
110.4
|
1.0
|
H
|
A:ARG267
|
4.0
|
100.5
|
1.0
|
CG
|
A:GLU264
|
4.0
|
66.2
|
1.0
|
HG2
|
A:GLU264
|
4.1
|
79.4
|
1.0
|
N
|
A:ARG267
|
4.2
|
83.8
|
1.0
|
OE2
|
A:GLU264
|
4.2
|
79.3
|
1.0
|
C08
|
A:Q5Q802
|
4.2
|
67.1
|
0.9
|
C14
|
A:Q5Q802
|
4.2
|
88.1
|
0.9
|
C
|
A:SER266
|
4.2
|
74.7
|
1.0
|
HB2
|
A:SER266
|
4.3
|
109.8
|
1.0
|
CD
|
A:GLU264
|
4.3
|
69.2
|
1.0
|
CA
|
A:SER266
|
4.4
|
71.5
|
1.0
|
HG
|
A:SER266
|
4.5
|
132.5
|
1.0
|
HB2
|
A:GLU467
|
4.5
|
88.6
|
1.0
|
HB3
|
A:GLU467
|
4.6
|
88.6
|
1.0
|
HA
|
A:ARG267
|
4.7
|
86.4
|
1.0
|
N
|
A:SER266
|
4.7
|
64.7
|
1.0
|
C07
|
A:Q5Q802
|
4.7
|
90.2
|
0.9
|
HB2
|
A:ARG267
|
4.7
|
74.5
|
1.0
|
O
|
A:SER266
|
4.8
|
73.6
|
1.0
|
HD2
|
A:PHE270
|
4.8
|
77.7
|
1.0
|
HG2
|
A:GLU467
|
4.9
|
70.7
|
1.0
|
CA
|
A:ARG267
|
4.9
|
72.0
|
1.0
|
|
Bromine binding site 2 out
of 2 in 6z2s
Go back to
Bromine Binding Sites List in 6z2s
Bromine binding site 2 out
of 2 in the Crystal Structure of Adhibin Analogue-Bound Myosin-2
Mono view
Stereo pair view
|
A full contact list of Bromine with other atoms in the Br binding
site number 2 of Crystal Structure of Adhibin Analogue-Bound Myosin-2 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Br802
b:158.3
occ:0.87
|
BR1
|
A:Q5Q802
|
0.0
|
158.3
|
0.9
|
C13
|
A:Q5Q802
|
1.9
|
92.4
|
0.9
|
HG3
|
A:GLU264
|
2.6
|
79.4
|
1.0
|
HA
|
A:GLU264
|
2.6
|
70.2
|
1.0
|
H161
|
A:Q5Q802
|
2.6
|
102.7
|
0.9
|
HB3
|
A:SER266
|
2.7
|
109.8
|
1.0
|
C14
|
A:Q5Q802
|
2.8
|
88.1
|
0.9
|
H
|
A:LYS265
|
2.9
|
93.6
|
1.0
|
C11
|
A:Q5Q802
|
2.9
|
96.1
|
0.9
|
N
|
A:SER266
|
3.0
|
64.7
|
1.0
|
N
|
A:LYS265
|
3.1
|
78.0
|
1.0
|
C
|
A:GLU264
|
3.2
|
78.1
|
1.0
|
CA
|
A:GLU264
|
3.3
|
58.5
|
1.0
|
C16
|
A:Q5Q802
|
3.3
|
85.6
|
0.9
|
C15
|
A:Q5Q802
|
3.3
|
94.7
|
0.9
|
CG
|
A:GLU264
|
3.4
|
66.2
|
1.0
|
BR2
|
A:Q5Q802
|
3.4
|
256.6
|
0.9
|
CB
|
A:SER266
|
3.5
|
91.5
|
1.0
|
HG2
|
A:GLU264
|
3.6
|
79.4
|
1.0
|
HB2
|
A:SER266
|
3.7
|
109.8
|
1.0
|
H
|
A:ARG267
|
3.7
|
100.5
|
1.0
|
CA
|
A:SER266
|
3.8
|
71.5
|
1.0
|
CB
|
A:GLU264
|
3.8
|
59.6
|
1.0
|
HB2
|
A:GLU467
|
3.8
|
88.6
|
1.0
|
C
|
A:LYS265
|
3.9
|
67.8
|
1.0
|
O
|
A:GLU264
|
3.9
|
80.5
|
1.0
|
CA
|
A:LYS265
|
4.1
|
73.0
|
1.0
|
HG2
|
A:LYS265
|
4.1
|
93.8
|
1.0
|
HG2
|
A:GLU467
|
4.1
|
70.7
|
1.0
|
HB2
|
A:GLU264
|
4.1
|
71.5
|
1.0
|
C07
|
A:Q5Q802
|
4.1
|
90.2
|
0.9
|
HG3
|
A:LYS265
|
4.2
|
93.8
|
1.0
|
C10
|
A:Q5Q802
|
4.2
|
47.9
|
0.9
|
OE1
|
A:GLU467
|
4.3
|
86.9
|
1.0
|
N
|
A:ARG267
|
4.3
|
83.8
|
1.0
|
O
|
A:LEU263
|
4.4
|
70.9
|
1.0
|
C
|
A:SER266
|
4.5
|
74.7
|
1.0
|
N
|
A:GLU264
|
4.5
|
61.6
|
1.0
|
CG
|
A:LYS265
|
4.5
|
78.2
|
1.0
|
HA
|
A:SER266
|
4.6
|
85.8
|
1.0
|
CB
|
A:GLU467
|
4.6
|
73.8
|
1.0
|
CD
|
A:GLU264
|
4.6
|
69.2
|
1.0
|
C02
|
A:Q5Q802
|
4.6
|
80.6
|
0.9
|
CD
|
A:GLU467
|
4.6
|
67.9
|
1.0
|
CG
|
A:GLU467
|
4.6
|
58.9
|
1.0
|
HB3
|
A:GLU264
|
4.6
|
71.5
|
1.0
|
OG
|
A:SER266
|
4.7
|
110.4
|
1.0
|
C05
|
A:Q5Q802
|
4.7
|
94.3
|
0.9
|
C08
|
A:Q5Q802
|
4.7
|
67.1
|
0.9
|
HA
|
A:LYS265
|
4.8
|
87.6
|
1.0
|
HB3
|
A:GLU467
|
4.9
|
88.6
|
1.0
|
CB
|
A:LYS265
|
4.9
|
66.6
|
1.0
|
H012
|
A:Q5Q802
|
4.9
|
91.6
|
0.9
|
C
|
A:LEU263
|
4.9
|
67.5
|
1.0
|
H101
|
A:Q5Q802
|
4.9
|
57.4
|
0.9
|
|
Reference:
A.Bader,
W.Ewert,
H.-J.Knoelker,
M.Preller,
G.Tsiavaliaris.
The Synthetic Carbazole Adhibin Acts As Selective Myosin Class-IX Inhibitor in Lung Cancer Cells To Be Published.
Page generated: Thu Jul 11 03:14:35 2024
|