Bromine in PDB 7cpd: Crystal Structure of T2R-Ttl-(+)-6-Br-JP18 Complex
Protein crystallography data
The structure of Crystal Structure of T2R-Ttl-(+)-6-Br-JP18 Complex, PDB code: 7cpd
was solved by
H.Jiang,
C.Luo,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
49.89 /
2.51
|
Space group
|
P 21 21 21
|
Cell size a, b, c (Å), α, β, γ (°)
|
104.782,
156.552,
182.591,
90,
90,
90
|
R / Rfree (%)
|
18.3 /
24
|
Other elements in 7cpd:
The structure of Crystal Structure of T2R-Ttl-(+)-6-Br-JP18 Complex also contains other interesting chemical elements:
Bromine Binding Sites:
The binding sites of Bromine atom in the Crystal Structure of T2R-Ttl-(+)-6-Br-JP18 Complex
(pdb code 7cpd). This binding sites where shown within
5.0 Angstroms radius around Bromine atom.
In total 2 binding sites of Bromine where determined in the
Crystal Structure of T2R-Ttl-(+)-6-Br-JP18 Complex, PDB code: 7cpd:
Jump to Bromine binding site number:
1;
2;
Bromine binding site 1 out
of 2 in 7cpd
Go back to
Bromine Binding Sites List in 7cpd
Bromine binding site 1 out
of 2 in the Crystal Structure of T2R-Ttl-(+)-6-Br-JP18 Complex
Mono view
Stereo pair view
|
A full contact list of Bromine with other atoms in the Br binding
site number 1 of Crystal Structure of T2R-Ttl-(+)-6-Br-JP18 Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Br501
b:61.5
occ:1.00
|
BR1
|
B:G9U501
|
0.0
|
61.5
|
1.0
|
C18
|
B:G9U501
|
2.0
|
54.5
|
1.0
|
C17
|
B:G9U501
|
2.9
|
48.7
|
1.0
|
C19
|
B:G9U501
|
2.9
|
53.7
|
1.0
|
H17
|
B:G9U501
|
2.9
|
64.5
|
1.0
|
H16
|
B:G9U501
|
3.0
|
58.4
|
1.0
|
O
|
B:ASN350
|
3.0
|
33.3
|
1.0
|
C
|
B:ASN350
|
3.5
|
29.8
|
1.0
|
O
|
B:VAL315
|
3.5
|
34.2
|
1.0
|
N
|
B:LYS352
|
3.9
|
27.3
|
1.0
|
CB
|
B:LYS352
|
4.0
|
27.1
|
1.0
|
N
|
B:VAL351
|
4.1
|
29.4
|
1.0
|
O
|
B:ASN258
|
4.1
|
33.9
|
1.0
|
CA
|
B:ASN350
|
4.1
|
35.3
|
1.0
|
C15
|
B:G9U501
|
4.2
|
48.8
|
1.0
|
N
|
B:VAL315
|
4.2
|
23.7
|
1.0
|
C20
|
B:G9U501
|
4.2
|
60.1
|
1.0
|
CB
|
B:THR314
|
4.3
|
24.5
|
1.0
|
CA
|
B:VAL351
|
4.4
|
28.4
|
1.0
|
C
|
B:VAL351
|
4.4
|
33.5
|
1.0
|
C
|
B:VAL315
|
4.4
|
31.8
|
1.0
|
CG2
|
A:VAL181
|
4.4
|
39.2
|
1.0
|
CG2
|
B:THR314
|
4.5
|
21.1
|
1.0
|
CG1
|
A:VAL181
|
4.5
|
29.8
|
1.0
|
CA
|
B:LYS352
|
4.6
|
30.1
|
1.0
|
O
|
B:ASN349
|
4.6
|
28.6
|
1.0
|
SD
|
B:MET259
|
4.7
|
37.0
|
1.0
|
CA
|
B:THR314
|
4.7
|
20.6
|
1.0
|
C16
|
B:G9U501
|
4.7
|
55.1
|
1.0
|
C
|
B:ASN258
|
4.9
|
34.3
|
1.0
|
CB
|
B:ASN258
|
4.9
|
22.4
|
1.0
|
CB
|
B:ASN350
|
4.9
|
32.9
|
1.0
|
H18
|
B:G9U501
|
4.9
|
72.2
|
1.0
|
C
|
B:THR314
|
5.0
|
30.2
|
1.0
|
CA
|
B:VAL315
|
5.0
|
26.0
|
1.0
|
|
Bromine binding site 2 out
of 2 in 7cpd
Go back to
Bromine Binding Sites List in 7cpd
Bromine binding site 2 out
of 2 in the Crystal Structure of T2R-Ttl-(+)-6-Br-JP18 Complex
Mono view
Stereo pair view
|
A full contact list of Bromine with other atoms in the Br binding
site number 2 of Crystal Structure of T2R-Ttl-(+)-6-Br-JP18 Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Br501
b:121.1
occ:1.00
|
BR1
|
D:G9U501
|
0.0
|
121.1
|
1.0
|
C18
|
D:G9U501
|
1.9
|
87.0
|
1.0
|
C19
|
D:G9U501
|
2.9
|
70.0
|
1.0
|
C17
|
D:G9U501
|
2.9
|
73.9
|
1.0
|
H17
|
D:G9U501
|
2.9
|
84.0
|
1.0
|
H16
|
D:G9U501
|
3.0
|
88.7
|
1.0
|
O
|
D:ASN350
|
3.3
|
43.2
|
1.0
|
C
|
D:ASN350
|
3.4
|
32.7
|
1.0
|
O
|
D:VAL315
|
3.5
|
37.3
|
1.0
|
CG1
|
C:VAL181
|
3.6
|
30.0
|
1.0
|
CA
|
D:ASN350
|
3.9
|
32.1
|
1.0
|
N
|
D:VAL351
|
3.9
|
32.6
|
1.0
|
N
|
D:LYS352
|
4.0
|
37.2
|
1.0
|
N
|
D:VAL315
|
4.0
|
34.1
|
1.0
|
CB
|
D:THR314
|
4.1
|
33.3
|
1.0
|
CB
|
D:LYS352
|
4.1
|
33.3
|
1.0
|
C15
|
D:G9U501
|
4.2
|
59.5
|
1.0
|
C20
|
D:G9U501
|
4.2
|
62.7
|
1.0
|
CA
|
D:VAL351
|
4.2
|
34.5
|
1.0
|
O
|
D:ASN258
|
4.2
|
35.1
|
1.0
|
C
|
D:VAL351
|
4.3
|
44.0
|
1.0
|
CG2
|
D:THR314
|
4.3
|
32.8
|
1.0
|
C
|
D:VAL315
|
4.3
|
43.4
|
1.0
|
CA
|
D:THR314
|
4.6
|
35.0
|
1.0
|
O
|
D:ASN349
|
4.6
|
42.2
|
1.0
|
CA
|
D:LYS352
|
4.7
|
37.9
|
1.0
|
C16
|
D:G9U501
|
4.7
|
58.6
|
1.0
|
CB
|
D:ASN350
|
4.7
|
32.8
|
1.0
|
SD
|
D:MET259
|
4.8
|
45.1
|
1.0
|
C
|
D:THR314
|
4.8
|
38.4
|
1.0
|
CA
|
D:VAL315
|
4.9
|
44.2
|
1.0
|
H18
|
D:G9U501
|
4.9
|
75.2
|
1.0
|
C
|
D:ASN258
|
5.0
|
35.2
|
1.0
|
|
Reference:
H.Jiang,
C.Luo.
Crystal Structure of T2R-Ttl-(+)-6-Br-JP18 Complex To Be Published.
Page generated: Sat Aug 21 12:15:45 2021
|