Bromine in PDB 7ejc: Human RAD51 Presynaptic Complex

The structure of Human RAD51 Presynaptic Complex also contains other interesting chemical elements:

Magnesium

(Mg)

3 atoms

The binding sites of Bromine atom in the Human RAD51 Presynaptic Complex (pdb code 7ejc). This binding sites where shown within 5.0 Angstroms radius around Bromine atom.
In total 6 binding sites of Bromine where determined in the Human RAD51 Presynaptic Complex, PDB code: 7ejc:
Jump to Bromine binding site number: 1; 2; 3; 4; 5; 6;

Bromine binding site 1 out of 6 in the Human RAD51 Presynaptic Complex


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 1 of Human RAD51 Presynaptic Complex within 5.0Å range: probe atom residue distance (Å) B Occ A:Br602 b:20.0 occ:1.00 BR1 A:J46602 0.0 20.0 1.0 C06 A:J46602 1.8 20.0 1.0 C01 A:J46602 2.7 20.0 1.0 O01 A:J46602 2.8 20.0 1.0 C08 A:J46602 3.0 20.0 1.0 S01 A:J46602 3.1 20.0 1.0 CE A:LYS58 3.1 133.8 1.0 CG A:LYS58 3.6 133.8 1.0 N01 A:J46602 3.6 20.0 1.0 CD A:LYS58 3.8 133.8 1.0 C03 A:J46602 4.1 20.0 1.0 C07 A:J46602 4.2 20.0 1.0 CG A:PRO56 4.2 128.2 1.0 NZ A:LYS58 4.2 133.8 1.0 CB A:GLU59 4.3 133.9 1.0 N A:GLU59 4.4 133.9 1.0 O02 A:J46602 4.4 20.0 1.0 CA A:GLU59 4.4 133.9 1.0 C10 A:J46602 4.5 20.0 1.0 C04 A:J46602 4.7 20.0 1.0 C02 A:J46602 4.9 20.0 1.0 CG A:GLU59 4.9 133.9 1.0 CB A:LYS58 4.9 133.8 1.0 C A:LYS58 4.9 133.8 1.0 C05 A:J46602 5.0 20.0 1.0

Bromine binding site 2 out of 6 in the Human RAD51 Presynaptic Complex


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 2 of Human RAD51 Presynaptic Complex within 5.0Å range: probe atom residue distance (Å) B Occ A:Br602 b:20.0 occ:1.00 BR2 A:J46602 0.0 20.0 1.0 C20 A:J46602 1.9 20.0 1.0 C19 A:J46602 2.7 20.0 1.0 C18 A:J46602 2.9 20.0 1.0 O A:LEU204 4.1 107.0 1.0 CB A:SER208 4.1 116.8 1.0 CD2 A:LEU255 4.1 110.6 1.0 C17 A:J46602 4.1 20.0 1.0 C16 A:J46602 4.1 20.0 1.0 CE A:MET251 4.2 101.0 1.0 CG A:LEU255 4.4 110.6 1.0 C A:LEU204 4.4 107.0 1.0 CD1 A:TYR205 4.5 112.5 1.0 OG A:SER208 4.5 116.8 1.0 CA A:TYR205 4.5 112.5 1.0 N A:TYR205 4.6 112.5 1.0 C12 A:J46602 4.6 20.0 1.0 CE1 A:TYR205 4.7 112.5 1.0 CB A:LEU204 4.8 107.0 1.0 CD1 A:LEU255 4.8 110.6 1.0 CB A:MET251 4.8 101.0 1.0 CG A:TYR205 5.0 112.5 1.0

Bromine binding site 3 out of 6 in the Human RAD51 Presynaptic Complex


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 3 of Human RAD51 Presynaptic Complex within 5.0Å range: probe atom residue distance (Å) B Occ C:Br404 b:20.0 occ:1.00 BR1 C:J46404 0.0 20.0 1.0 C06 C:J46404 1.8 20.0 1.0 C01 C:J46404 2.7 20.0 1.0 CE C:LYS58 2.8 126.9 1.0 O01 C:J46404 2.8 20.0 1.0 C08 C:J46404 3.0 20.0 1.0 S01 C:J46404 3.1 20.0 1.0 O B:ASP231 3.5 108.2 1.0 CG C:LYS58 3.5 126.9 1.0 N01 C:J46404 3.6 20.0 1.0 CD C:LYS58 3.6 126.9 1.0 NZ C:LYS58 3.9 126.9 1.0 OD1 B:ASP231 4.1 108.2 1.0 C03 C:J46404 4.1 20.0 1.0 C07 C:J46404 4.2 20.0 1.0 CG C:PRO56 4.2 122.5 1.0 O02 C:J46404 4.4 20.0 1.0 C B:ASP231 4.5 108.2 1.0 C10 C:J46404 4.5 20.0 1.0 N C:GLU59 4.6 130.2 1.0 CB C:GLU59 4.6 130.2 1.0 CA B:ASP231 4.6 108.2 1.0 C04 C:J46404 4.7 20.0 1.0 CA C:GLU59 4.8 130.2 1.0 C02 C:J46404 4.9 20.0 1.0 CG B:ASP231 4.9 108.2 1.0 CB C:LYS58 4.9 126.9 1.0 C05 C:J46404 5.0 20.0 1.0

Bromine binding site 4 out of 6 in the Human RAD51 Presynaptic Complex


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 4 of Human RAD51 Presynaptic Complex within 5.0Å range: probe atom residue distance (Å) B Occ C:Br404 b:20.0 occ:1.00 BR2 C:J46404 0.0 20.0 1.0 C20 C:J46404 1.9 20.0 1.0 C19 C:J46404 2.7 20.0 1.0 C18 C:J46404 2.9 20.0 1.0 CD2 C:LEU255 4.0 110.5 1.0 CE C:MET251 4.1 101.1 1.0 C17 C:J46404 4.1 20.0 1.0 C16 C:J46404 4.1 20.0 1.0 CG C:LEU255 4.3 110.5 1.0 CB C:SER208 4.4 118.0 1.0 O C:LEU204 4.4 106.1 1.0 CB C:MET251 4.5 101.1 1.0 C12 C:J46404 4.6 20.0 1.0 O C:MET251 4.6 101.1 1.0 C C:LEU204 4.7 106.1 1.0 OG C:SER208 4.8 118.0 1.0 CD1 C:TYR205 4.8 110.9 1.0 CD1 C:LEU255 4.8 110.5 1.0 CG C:MET251 4.9 101.1 1.0 CB C:LEU204 4.9 106.1 1.0 CE1 C:TYR205 4.9 110.9 1.0 N C:TYR205 5.0 110.9 1.0 CA C:TYR205 5.0 110.9 1.0

Bromine binding site 5 out of 6 in the Human RAD51 Presynaptic Complex


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 5 of Human RAD51 Presynaptic Complex within 5.0Å range: probe atom residue distance (Å) B Occ B:Br403 b:20.0 occ:1.00 BR1 B:J46403 0.0 20.0 1.0 C06 B:J46403 1.8 20.0 1.0 C01 B:J46403 2.7 20.0 1.0 O01 B:J46403 2.8 20.0 1.0 C08 B:J46403 3.0 20.0 1.0 S01 B:J46403 3.1 20.0 1.0 CE B:LYS58 3.1 124.7 1.0 N01 B:J46403 3.6 20.0 1.0 CG B:LYS58 3.6 124.7 1.0 CD B:LYS58 3.8 124.7 1.0 O A:ASP231 3.8 109.5 1.0 CG B:PRO56 4.1 120.3 1.0 C03 B:J46403 4.1 20.0 1.0 NZ B:LYS58 4.2 124.7 1.0 C07 B:J46403 4.2 20.0 1.0 OD1 A:ASP231 4.2 109.5 1.0 O02 B:J46403 4.4 20.0 1.0 CB B:GLU59 4.4 126.0 1.0 N B:GLU59 4.5 126.0 1.0 C10 B:J46403 4.5 20.0 1.0 CA B:GLU59 4.6 126.0 1.0 C04 B:J46403 4.7 20.0 1.0 C A:ASP231 4.8 109.5 1.0 C02 B:J46403 4.9 20.0 1.0 CA A:ASP231 4.9 109.5 1.0 CG B:GLU59 4.9 126.0 1.0 CB B:LYS58 5.0 124.7 1.0 C05 B:J46403 5.0 20.0 1.0

Bromine binding site 6 out of 6 in the Human RAD51 Presynaptic Complex


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 6 of Human RAD51 Presynaptic Complex within 5.0Å range: probe atom residue distance (Å) B Occ B:Br403 b:20.0 occ:1.00 BR2 B:J46403 0.0 20.0 1.0 C20 B:J46403 1.9 20.0 1.0 C19 B:J46403 2.7 20.0 1.0 C18 B:J46403 2.9 20.0 1.0 CD2 B:LEU255 4.0 109.9 1.0 C17 B:J46403 4.1 20.0 1.0 CB B:SER208 4.1 118.1 1.0 C16 B:J46403 4.1 20.0 1.0 O B:LEU204 4.2 107.1 1.0 CE B:MET251 4.2 99.5 1.0 CG B:LEU255 4.2 109.9 1.0 C B:LEU204 4.5 107.1 1.0 OG B:SER208 4.5 118.1 1.0 C12 B:J46403 4.6 20.0 1.0 CD1 B:TYR205 4.6 111.8 1.0 CA B:TYR205 4.7 111.8 1.0 N B:TYR205 4.7 111.8 1.0 CB B:MET251 4.7 99.5 1.0 CD1 B:LEU255 4.7 109.9 1.0 CB B:LEU204 4.8 107.1 1.0 CE1 B:TYR205 4.8 111.8 1.0 O B:MET251 4.9 99.5 1.0

J.Xu, L.Zhao, S.Peng, H.Chu, R.Liang, M.Tian, P.P.Connell, G.Li, C.Chen, H.W.Wang. Mechanisms of Distinctive Mismatch Tolerance Between RAD51 and DMC1 in Homologous Recombination. Nucleic Acids Res. V. 49 13135 2021.
ISSN: ESSN 1362-4962
PubMed: 34871438
DOI: 10.1093/NAR/GKAB1141