Bromine in PDB 7f30: Crystal Structure of Oxdb E85A in Complex with Z-2- (3-Bromophenyl) Propanal Oxime

Enzymatic activity of Crystal Structure of Oxdb E85A in Complex with Z-2- (3-Bromophenyl) Propanal Oxime

All present enzymatic activity of Crystal Structure of Oxdb E85A in Complex with Z-2- (3-Bromophenyl) Propanal Oxime:
4.99.1.7;

Protein crystallography data

The structure of Crystal Structure of Oxdb E85A in Complex with Z-2- (3-Bromophenyl) Propanal Oxime, PDB code: 7f30 was solved by N.Muraki, D.Matsui, Y.Asano, S.Aono, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

*Resolution Low / High (Å)*	40.79 / 2.00
*Space group*	P 1 2₁ 1
*Cell size a, b, c (Å), α, β, γ (°)*	49.922, 64.685, 52.563, 90, 90.49, 90
*R / R_free (%)*	18.4 / 21.7

Other elements in 7f30:

The structure of Crystal Structure of Oxdb E85A in Complex with Z-2- (3-Bromophenyl) Propanal Oxime also contains other interesting chemical elements:

Iron

(Fe)

1 atom

Bromine Binding Sites:

The binding sites of Bromine atom in the Crystal Structure of Oxdb E85A in Complex with Z-2- (3-Bromophenyl) Propanal Oxime (pdb code 7f30). This binding sites where shown within 5.0 Angstroms radius around Bromine atom.
In total only one binding site of Bromine was determined in the Crystal Structure of Oxdb E85A in Complex with Z-2- (3-Bromophenyl) Propanal Oxime, PDB code: 7f30:

Bromine binding site 1 out of 1 in 7f30

Go back to

Bromine Binding Sites List in 7f30

Bromine binding site 1 out of 1 in the Crystal Structure of Oxdb E85A in Complex with Z-2- (3-Bromophenyl) Propanal Oxime

Mono view

Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 1 of Crystal Structure of Oxdb E85A in Complex with Z-2- (3-Bromophenyl) Propanal Oxime within 5.0Å range:

probe	atom	residue	distance (Å)	B	Occ
A:Br402 b:109.4 occ:1.00	BR9	A:0WQ402	0.0	109.4	1.0
	C08	A:0WQ402	1.9	48.2	1.0
	C10	A:0WQ402	2.8	46.3	1.0
	C07	A:0WQ402	2.9	45.9	1.0
	CA	A:SER130	3.5	27.5	1.0
	CB	A:SER130	3.7	32.5	1.0
	CB	A:ALA14	3.8	29.8	1.0
	N	A:SER130	3.9	28.4	1.0
	O1D	A:HEM401	4.0	41.2	1.0
	O	A:HIS129	4.1	29.4	1.0
	C11	A:0WQ402	4.1	50.1	1.0
	C	A:HIS129	4.1	30.3	1.0
	C06	A:0WQ402	4.2	40.5	1.0
	CD2	A:LEU128	4.2	29.4	1.0
	O	A:ASN13	4.3	35.8	1.0
	ND1	A:HIS150	4.4	33.5	1.0
	CG	A:LEU128	4.4	27.1	1.0
	CA	A:ALA14	4.6	32.9	1.0
	C12	A:0WQ402	4.7	44.3	1.0
	CGD	A:HEM401	4.7	38.4	1.0
	C	A:SER130	4.8	30.9	1.0
	CE1	A:HIS150	4.8	34.6	1.0
	CBD	A:HEM401	4.8	32.8	1.0

Reference:

D.Matsui, N.Muraki, K.Chen, T.Mori, A.A.Ingram, K.Oike, H.Groger, S.Aono, Y.Asano. Crystal Structural Analysis of Aldoxime Dehydratase From Bacillus Sp. Oxb-1: Importance of Surface Residues in Optimization For Crystallization. J.Inorg.Biochem. V. 230 11770 2022.
ISSN: ISSN 0162-0134
PubMed: 35272237
DOI: 10.1016/J.JINORGBIO.2022.111770

Page generated: Thu Jul 11 03:47:39 2024

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