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Bromine in PDB 7ftc: Sdcbp Pandda Analysis Group Deposition -- the Pdz Domans of Sdcbp in Complex with Z1509711879

Protein crystallography data

The structure of Sdcbp Pandda Analysis Group Deposition -- the Pdz Domans of Sdcbp in Complex with Z1509711879, PDB code: 7ftc was solved by W.J.Bradshaw, V.L.Katis, C.Bountra, F.Von Delft, P.E.Brennan, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 57.17 / 1.87
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 80.205, 49.2, 114.858, 90, 95.24, 90
R / Rfree (%) 21 / 25.6

Bromine Binding Sites:

The binding sites of Bromine atom in the Sdcbp Pandda Analysis Group Deposition -- the Pdz Domans of Sdcbp in Complex with Z1509711879 (pdb code 7ftc). This binding sites where shown within 5.0 Angstroms radius around Bromine atom.
In total 3 binding sites of Bromine where determined in the Sdcbp Pandda Analysis Group Deposition -- the Pdz Domans of Sdcbp in Complex with Z1509711879, PDB code: 7ftc:
Jump to Bromine binding site number: 1; 2; 3;

Bromine binding site 1 out of 3 in 7ftc

Go back to Bromine Binding Sites List in 7ftc
Bromine binding site 1 out of 3 in the Sdcbp Pandda Analysis Group Deposition -- the Pdz Domans of Sdcbp in Complex with Z1509711879


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 1 of Sdcbp Pandda Analysis Group Deposition -- the Pdz Domans of Sdcbp in Complex with Z1509711879 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Br301

b:98.7
occ:1.00
BR10 C:YFR301 0.0 98.7 1.0
C09 C:YFR301 2.0 111.2 1.0
C08 C:YFR301 2.9 113.8 1.0
C11 C:YFR301 2.9 111.0 1.0
O12 C:YFR301 3.2 106.5 1.0
O C:PHE211 3.4 46.0 1.0
N C:PHE211 3.7 46.5 1.0
CD1 C:ILE212 3.9 58.7 1.0
O C:HOH467 4.0 57.4 1.0
CA C:GLY210 4.0 49.8 1.0
CG2 C:VAL222 4.1 60.0 1.0
CB C:HIS208 4.1 69.1 1.0
C C:GLY210 4.1 50.2 1.0
C C:PHE211 4.1 46.0 1.0
C13 C:YFR301 4.3 115.3 1.0
N C:GLY210 4.3 51.7 1.0
C07 C:YFR301 4.3 120.8 1.0
CG C:HIS208 4.4 73.8 1.0
CA C:PHE211 4.5 47.2 1.0
CD2 C:HIS208 4.6 76.2 1.0
C14 C:YFR301 4.8 121.0 1.0

Bromine binding site 2 out of 3 in 7ftc

Go back to Bromine Binding Sites List in 7ftc
Bromine binding site 2 out of 3 in the Sdcbp Pandda Analysis Group Deposition -- the Pdz Domans of Sdcbp in Complex with Z1509711879


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 2 of Sdcbp Pandda Analysis Group Deposition -- the Pdz Domans of Sdcbp in Complex with Z1509711879 within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Br301

b:58.7
occ:0.68
BR10 D:YFR301 0.0 58.7 0.7
C09 D:YFR301 1.9 56.0 0.7
C11 D:YFR301 2.9 55.5 0.7
C08 D:YFR301 2.9 55.2 0.7
O12 D:YFR301 3.1 55.7 0.7
OD2 D:ASP256 3.6 50.3 0.7
CB D:ASP256 3.7 47.8 0.7
CA D:GLN253 3.8 47.2 1.0
CB D:GLN253 3.9 48.9 1.0
CG D:GLN253 4.0 48.6 1.0
BR10 D:YFR302 4.1 49.4 0.7
O D:GLN253 4.1 43.5 1.0
C08 D:YFR302 4.1 48.0 0.7
CG D:ASP256 4.1 49.2 0.7
C13 D:YFR301 4.2 54.8 0.7
C07 D:YFR301 4.3 54.2 0.7
C09 D:YFR302 4.4 48.7 0.7
C D:GLN253 4.5 45.4 1.0
C14 D:YFR301 4.7 54.9 0.7
O06 D:YFR302 4.8 49.9 0.7
CD D:GLN253 4.9 51.2 1.0
CG1 D:ILE257 4.9 45.4 1.0
NE2 D:GLN253 5.0 55.7 1.0

Bromine binding site 3 out of 3 in 7ftc

Go back to Bromine Binding Sites List in 7ftc
Bromine binding site 3 out of 3 in the Sdcbp Pandda Analysis Group Deposition -- the Pdz Domans of Sdcbp in Complex with Z1509711879


Mono view


Stereo pair view

A full contact list of Bromine with other atoms in the Br binding site number 3 of Sdcbp Pandda Analysis Group Deposition -- the Pdz Domans of Sdcbp in Complex with Z1509711879 within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Br302

b:49.4
occ:0.68
BR10 D:YFR302 0.0 49.4 0.7
C09 D:YFR302 1.9 48.7 0.7
C08 D:YFR302 2.9 48.0 0.7
C11 D:YFR302 2.9 48.7 0.7
O12 D:YFR302 3.1 48.9 0.7
CG2 D:THR260 3.8 51.5 1.0
BR10 D:YFR301 4.1 58.7 0.7
C13 D:YFR302 4.2 48.0 0.7
C07 D:YFR302 4.2 48.6 0.7
O D:ASP256 4.2 47.9 0.7
C D:ASP256 4.3 47.3 0.7
CB D:ASP256 4.3 47.8 0.7
OG1 D:THR260 4.4 45.7 1.0
N D:ILE257 4.5 47.3 1.0
CG1 D:ILE257 4.6 45.4 1.0
CA D:ILE257 4.6 46.1 1.0
CB D:THR260 4.7 47.0 1.0
C14 D:YFR302 4.7 47.8 0.7
CA D:ASP256 5.0 47.3 0.7

Reference:

W.J.Bradshaw, V.L.Katis, C.Bountra, F.Von Delft, P.E.Brennan. Sdcbp Pandda Analysis Group Deposition To Be Published.
Page generated: Thu Jul 11 03:53:33 2024

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